Transcript

smarce1-202

ID
ZDB-TSCRIPT-090929-7739
Name
smarce1-202 Nomenclature History
Previous Names
  • smarce1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
OTTDART00000024961 (1) [ Show ] (double-click sequence to select) [Download]
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT 
>tpe|OTTDART00000024961|OTTDARG00000020074|ZDB-GENE-030131-967 smarce1|OTTDARP00000020556 smarce1-001 LG_ BX890590.11 Danio rerio protein_coding KNOWN, 2072 bp
AGATGCTGCTCAAAATGTGTCACATCCTGGCGGAGCACCA
TTGAGGGAACAAAGGAGCTGGGGAACCAAATGATGGGGAT
AGCGTGATATCCTCAACCCTACAATCAAGATGTCAAAGCG
GCCCCCCTATGCCCCTGCCCCCACCCCGGCCCCCACAACA
CAAATGCCCACCACCCCTGGGTTTGTGGGGTACAACCCAT
ACAGCCATCTGGCCTACAACAACTACAGGCTGGGAGGGAA
CCCCAGCGGGAACAACAGGAACTCCTCAGGGATCACTGTT
CCTAAGCCGCCCAAACCGCCCGACAAGCCGCTGATGCCCT
ACATGCGGTATAGCCGGAAGGTTTGGGACCAAGTTAAAGC
CTCTAATCCTGACCTGAAGCTATGGGAGATTGGCAAGATC
ATTGGTGGCATGTGGAGGGACCTCACCGATGAGGAAAAAC
AGGACTATTTAAATGAATATGAGGCAGAAAAGATTGAGTA
TAATGACTCTCTGAAGGCCTACCACAACTCTCCAGCCTAC
CTTGCGTACGTTAATGCAAAGAACCGCGCAGAAGCAGCTC
TAGAGGAAGAAAGCCGGCAGAGACAGTCACGTTTAGACAA
AGGGGAGCCCTACATGAGCATCCAACCCGCTGAGGACCCC
GATGACTATGACGACGGGTTCTCCATGAAGCACACAGCGG
CAGCTCGTTTCCAGCGGAATCACCGGCTAATCAGTGACAT
TCTGAGTGAGGTGGTGGTGCCTGATGTTCGCTCGGTCGTG
ACCACCGCTCGCATGCAGGTCCTCAAGCGCCAGGTCCAGT
CCCTCATGGTGCACCAGCGAAAACTGGAGGCCGAGCTGCT
TCAAATCGAGGACCGGCATCAGGAGAAGAAGAGGAGATTC
CTGGAGAGCACAGACTCCTTCAATAACGAGCTCAAACGGC
TCTGCGGTCTGAAAGTGGAGGTGGACATGGAGAAGCTGGC
AGCTGAAATGGCTGCTGCAGAAGAGGCGGCTCGCCGGAGG
GCGGAGGAGAGAGAGCGGGAAGCAGCGGAGCAGGTGGAGC
GAGCCGCTCAAGAAGAGCAACAGCCCGCCAGCGCCCAGGC
CAATGCCAACACAGAGCAGACCTCTGCCAGCGAGACCAAG
GATGGAGAAGACAAGCCCACCCCGATGGAGACAGAGTCTC
TTGCTGAAACTTCTGAAGGATCTCAGGAGGCTGAGCAAGG
CACACCTGCAGCAGGAGAGAAAGCAGCCCAGCCTGAGCCT
GCAGAGGGCGCAACAGACGAGGGCACCAGCGACAGCACGG
CTCCATCTGAGAGCAGCTCCGGACCCCCAGCAGAACACCA
GACCGCATCAGACAACACCCCTGAGGAGCGCCTGCCCACC
CAGCCACAATAACACATCCACACACTCTCACCTCGCTCTG
CGTAGAGTCATGTGTCCTCTAGGATTTACCGGTTAATCCT
GTGACCTGGCAGTGCATGAGAGTGAGAACAGTGAAAATTA
CTTTTCTCCCCCTCATAATCATCTACAGTGACAATGACAG
CAAATTCTTAATTGCCGTTTCACAGAGATTCACCTGTTCA
CTTGAACTGAAGCCTGATGTTACAAGCCCCCTTCAGTCAT
CTTAAGCTTTATGGCCATTTAAACGTCATTTTATCTTTTT
AAAGCAGAAATAAATTAAGCAGATGTTGTGTAAAATGTAA
CTTTTTCATCTTGTAGACACCAAATGGGTTGCGAAAGCAG
AACGGCAAGGTTATTTGCTGTTGCCTTACCATTTATCTAC
CTGTGGCATGGCCATTTTATGCTGTATCTTTGTTTCTGAT
ATTTTTTTCACTATTTAGTTGAGTAGTTTGTGGATTTAGT
GCTTCTCTTTCTCTCACTTTATTCAAGATTTCTTTTGTAC
ATTTTTCCAAAATAAAGCCATGCTAACATTTCATAATTTT
TCATCGCAACAGATTGACCATCCAGAGCAGAGGGACACTG
TTCTGCTGGTGTCTTCATGGAATGGTATTATATTAAGCCT
CTGGATTATTGTGTTTTTGTATTGTTGGAAGGTATTCCCT
CAATAAAGTGATTTCTATGTCTGTTTTAAAAA
Related Transcripts
Transcripts related to smarce1
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smarce1-201 (1)
Ensembl
Ensembl 1,995 nt
ZFIN BLAST
mRNA smarce1-202 Ensembl 2,072 nt
mRNA smarce1-203 (1)
Ensembl
Ensembl 1,263 nt
ZFIN BLAST
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations
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