Transcript

smek1-201

ID
ZDB-TSCRIPT-090929-755
Name
smek1-201 Nomenclature History
Previous Names
  • smek1-001
  • si:dkey-65b13.2-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000061843 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000061843.8|gene_biotype:protein_coding|ENSDARG00000042187.10 transcript_biotype:protein_coding gene_symbol:smek1 cdna chromosome:GRCz11:20:33467161:33487729:-1
GGACCCAAGATGGCCGAATCTTCACAGTGGGGCTAATAAT
TACTTTTCGTCAAGACGCTGCTATTTCATGGTGCTCGACG
CTCGCGCTGGCCATTCGTCGTTCCGGAAAGCAAAACAAGT
GACTCTGTTCAAGTAGTTGCATCGGGGAATGTTTATTTAT
GCGTGAAGAGACTGGCTGGTCCAACCGCGGCCCTTAGCCA
GAATATGGCGGAATACCTGGAGAAAATATAGCTTAGCTTA
TTATGAACGCGCCGCTTTATACACGACTCTTCCCGCCTTT
TCACCGACCTCGCGTGAGTATAATGATTAAATAGCGTTAT
CGGTACGTCTCTGAAATTCATTCGCGTGTGTTTTGCGCAA
TTCTGTGTTAAAATGACTCTCGAGAGGAGATAGCCTGCTA
GCTGAGGCGCTAGCTACGCTAACCCCGTTTGACTGAATTA
GTCGCAGCGTTAGCTTAGCCTAGCTAGCTTAAAGTAAGGG
GGCACGAAGAAGAGCAAACACTTTCTTCATCCGCGCTCTG
GCTGCATGCTTTTAAACTCATCTCACTCTTATTTTTCGTG
CTTCTGTTTATAGAGAGTTTAAAATACCGGGTATGTTGTG
GGGAGTCTCGGCTGCACACAGCAGCTAGCTGACCATCACT
GGACTGGTCAGAATAATTGTGTGGACAGCGCAAGTTTACT
GCGAGAGACTCCACAACAACACACTGCTTCAGCTCCTCGC
CCGCGAACGCCGTACATTTCAGTTTGAAGTTGACATCAGA
TTCTGTTGCATCTCGAGGACTTTGAGATTTATTGAATCAA
GGGCAAAAGCCTATCCGAGAGTTACTTGCAAGGATGACTG
ACACTCGTAGACGAGTAAAAGTGTACACTCTGAATGAGGA
CCGCCAGTGGGACGATCGGGGAACGGGACATGTGTCATCC
GCCTACGTGGAGAGGCTCAAAGGCATGTCTCTCCTGGTGC
GCGCCGAAAGCGATGGGTCACTGCTGCTGGAGTCCAAAAT
CAATCCTAACACCGCCTATCAAAAACAGCAGGACACATTA
ATAGTTTGGTCTGAGGCTGAAAACTATGACCTGGCCCTCA
GCTTCCAGGAAAAGGCTGGTTGTGATGAGATCTGGGAGAA
AATATGTCAGGTCCAGGGAAAGGACCCATCGGTAGACATC
ACCCAGGAGCTGATAGATGAGTCTGAGGAGGAGCGTTTTG
ATGACATGTCCTCTCCTGGTCTTGAACTTCCTCCATGTGA
ACTCTCCCGATTGGAGGAGGTGGCCGAGCTGGTGGCGTCA
TCCTTGCCTTCTCCGCTACGGCGGGAAAAGCTGGCCCTGG
CGCTGGAGAACGAGGGCTACATCCGCAAGCTGCTGGAGCT
TTTCCGCGTCTGCGAGGACTTAGAAAACAGAGAAGGTCTG
CATCACCTCTATGACATCATCAAAGGCATTTTCCTACTCA
ATCGCACGGCGCTCTTTGAAGTCATGTTCTCTGAAGAATG
CATCATGGATGTGATTGGCTGTCTGGAGTTTGATCCATCG
CTACCCCAACCACGGAGGCATCGGGAGTTCCTGACCACCA
CTGCACGCTTTAAAGAGGTCATTCCCATTTCGGACCCAGA
GCTGCGGCAGAAGATCCACCAGACGTACCGGGTGCAGTAT
ATTCAGGACATGGTGCTGCCCACTCCATCGGTCTTTGAAG
AAAACATGCTTTCCACCCTCCACTCCTTCATCTTCTTCAA
CAAAGTGGAGATTGTTGGCATGCTGCAGGATGATGAGAAG
TTTTTGACTGAGCTCTTTGCGCAGCTAACTGATGAAGCCA
CAGATGACGACAAACGGCACGAATTGGTAAACTTCCTGAA
GGAGTTTTGTGCGTTTTCACAAACGTTACAACCACAGAAC
AGAGATGCGTTCTTTAAAACCCTTTCCAACATGGGAATCC
TGCAAGCGCTGGAAGTTATTCTTGGCATGGATGATGTGCA
AGTGCGTGGAGCAGCCACTGATATCTTCTCCTACCTGGTG
GAGTACAACCCTTCTATGGTGCGAGAGTTTGTCATGCAGG
AGTCACAGCAGAATGATGATGACATTCTGTTGATAAATCT
GATCATTGAGCATATGATCTGTGACACGGATCCTGAGTTG
GGGGGAGCTGTTCAGCTTATGGGTTTGCTCAGGACGCTAG
TGGACCCAGAGAACATGCTAGCAACTGCTAATAAAACTGA
GAAGACCGAGTTTTTGAGCTTCTTCTATAAGCATTGCATG
CATGTGCTCTCCGCTCCACTTCTTGCCAACACCACTGAAG
AAAAACCCAGCAAAGATGATTTCCAGACATGTCAGCTGCT
GGCTCTGATCGTAGAGCTGCTCACTTTCTGCGTGGAGCAT
CACACGTATCACATAAAGAACTACATCATCAACAAAGACA
TCCTGCGCAGAGTGCTGGTGCTCACTGCATCACAACATGC
TTTCCTAGCCTTATGTGCTTTGCGTTTCATGAGAAAAATC
ATTGGCCTGAAGGATGAGTTTTATAACCGATACATTATGA
GGAACTTCCTGTTTGAGCCAGTGGTCAAAGCTTTCCTCAA
TAATGGATCCAGATACAACCTCATAAACTCAGCCATTATA
GAGATGTTTGAGTATGTCAGAGTGGAGGATGTGAAGTCAC
TGACGGCTCATATCATAGAGAACTACTGGAAGGGCCTGGA
GGACGTAGACTATGTTCAGACGTTTAAAGGACTAAAGCTC
CGATATGAACAGCAGAGAGAAAGACAGGACAACCCAAAAC
TTGACAGTATGCGGTCGATTCTGAGAAATCACCGTTTTCG
CCGGGATGCACGGACACTGGAAGACGAGGAGGAGATGTGG
TTTAATACGGATGAGGAAGACTTAGAGGATGGTGAAGCAG
TTGTGCCTCCGTCGGACAAGATGAAGAATGACGAGGACCT
TATGGATCCCATCAGCAAATTTATGGAGAGGAAAAAATTG
AAAGATTCAGAAGAGAAGGAGGTGTTGACAGGGAAAGCAA
GTCTCTCAGGACGGCAAAGTCCCAGTTTTAAACTGTCCTT
CTCCAGCTCGCCAAAGGCAAGCCTGTCCTCTCCGCCGACT
GCATCCCTTCATCCCGGTTCACCTGGTTCTCCTAGCTCTC
CCGGGACAGGGGCCCGGAGCTCTCCCCCTTCGGCAGCTGT
CACCACTAAGGGAGGTTTAGTGGGGCTGGTGGACTATCCT
GATGATGACGAAGAGGACGAGGATGAGGAAGATGCAGACA
GTAAAGAAGAAAGTCCTCCGCTGTCCAAGAAGTCCAAGCT
GAGCTCCTAAAAGCACTCCCTCCTCAATCAGCACAGTCAC
GCTCGAAGGGAGCTTCATCCAGAGACTTTTCCAGTGCTCA
GCCTAGAACTCAAACTGAAACTAAATGAATGATGATGAAT
ACACAAATGAATGGATAAATGAACGAATGCAGCCCCCCGC
AGGAGTCCACGGGGCGCCATGTGAGGAACGGAGGACAGGG
AGAGCAAGAGAGGGAGAAGATTCGGTCCCAGAACCAAAAG
GTGAATGTCTCCACGTGGAGTTTGTCCAAGTGCCAATCTG
CAAGAGAGAGAGAGAGAGACTCGTGAAGCGGACAGAGGGA
TGGAGGACTGTGGTCTGGACAAAGAATTATAATAAAATAA
GAAATTAATTTCGACAAAGCTAAAAGTTCTGGGGGGTAAA
ACAGACCTCACACGCAGTCCGTCAGTCAGTCGTTCACTCA
CAGACACTCGAACTGTTGCCCCACAGAGCGTCCCAGGCCT
GGACCAGGACACACTGCCCCCCCCTCTCAGGGAAGGACCT
CACATGACCCGAACTGGGCCAGCCAATCCACAACCACCAC
TCACCTTTGCTGATCTCCATCTCCATTTCTTTCTCTCCTT
CCTCCAGCTTTTTTTTCTGTTGTTTTTTTTCCCCCTTGTT
TTTGACTTTCTAGGGCCAGGCGGGACACTATAGGGAGCAA
AGAAGTCTGGGTCGTCATTGTTTAAGATGTCACTGTTGTT
CTTGTGGCTCAGCGGAAGTTCTTCCTCTTTCAAAGCCAGC
AGTTCCCTCCTTTTTCTTATTCTGTTGTTCTCCTCTCTGG
TTTTTTTAAAATGACACAAAGAGACCTGCCTTTAAATGTT
CAGGACGTTTTCAGCCGCACTTGAACAGGTTTTTAAAACC
TCAGTGGGGGGGAGATAGTTTTACCCTTTTTTTGCCCTTC
AAAACTGCAGATTTTTTGGAAAATTTGTAAGCCCGTCTTG
ATTAAAGATTGAGTGGAACTCTATAGATGTGATTGATTTC
TGTCATATCTTCATTTTTTTTTCTTTTCTTTTACTTGTGT
ACACTCTTAGTTGTTCAGTATATTTGGGACCATTAAAAGA
TCTTTGCTGTAGTAGATCTCTCCCGGTTGTGCTGGTTCCC
TGTATTATGTTCAACTGTGCTGATCTTTTTGTTATTTGAA
CTGGGATTTGGTCATTGAAATGATCCTCCTGTCTGCTCGT
CTGAATACGTCAATGGAGAAGCCGTGTCTCTGCTAAACAG
CCTGCACACAATTAAAGATAACAGTTTTTATTTTCTGAAA
AA

OTTDART00000006527 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000006527|OTTDARG00000005961|ZDB-GENE-030131-3958 smek1|OTTDARP00000005815 smek1-001 LG_ AL929220.13 Danio rerio protein_coding KNOWN, 4562 bp
GGACCCAAGATGGCCGAATCTTCACAGTGGGGCTAATAAT
TACTTTTCGTCAAGACGCTGCTATTTCATGGTGCTCGACG
CTCGCGCTGGCCATTCGTCGTTCCGGAAAGCAAAACAAGT
GACTCTGTTCAAGTAGTTGCATCGGGGAATGTTTATTTAT
GCGTGAAGAGACTGGCTGGTCCAACCGCGGCCCTTAGCCA
GAATATGGCGGAATACCTGGAGAAAATATAGCTTAGCTTA
TTATGAACGCGCCGCTTTATACACGACTCTTCCCGCCTTT
TCACCGACCTCGCGTGAGTATAATGATTAAATAGCGTTAT
CGGTACGTCTCTGAAATTCATTCGCGTGTGTTTTGCGCAA
TTCTGTGTTAAAATGACTCTCGAGAGGAGATAGCCTGCTA
GCTGAGGCGCTAGCTACGCTAACCCCGTTTGACTGAATTA
GTCGCAGCGTTAGCTTAGCCTAGCTAGCTTAAAGTAAGGG
GGCACGAAGAAGAGCAAACACTTTCTTCATCCGCGCTCTG
GCTGCATGCTTTTAAACTCATCTCACTCTTATTTTTCGTG
CTTCTGTTTATAGAGAGTTTAAAATACCGGGTATGTTGTG
GGGAGTCTCGGCTGCACACAGCAGCTAGCTGACCATCACT
GGACTGGTCAGAATAATTGTGTGGACAGCGCAAGTTTACT
GCGAGAGACTCCACAACAACACACTGCTTCAGCTCCTCGC
CCGCGAACGCCGTACATTTCAGTTTGAAGTTGACATCAGA
TTCTGTTGCATCTCGAGGACTTTGAGATTTATTGAATCAA
GGGCAAAAGCCTATCCGAGAGTTACTTGCAAGGATGACTG
ACACTCGTAGACGAGTAAAAGTGTACACTCTGAATGAGGA
CCGCCAGTGGGACGATCGGGGAACGGGACATGTGTCATCC
GCCTACGTGGAGAGGCTCAAAGGCATGTCTCTCCTGGTGC
GCGCCGAAAGCGATGGGTCACTGCTGCTGGAGTCCAAAAT
CAATCCTAACACCGCCTATCAAAAACAGCAGGACACATTA
ATAGTTTGGTCTGAGGCTGAAAACTATGACCTGGCCCTCA
GCTTCCAGGAAAAGGCTGGTTGTGATGAGATCTGGGAGAA
AATATGTCAGGTCCAGGGAAAGGACCCATCGGTAGACATC
ACCCAGGAGCTGATAGATGAGTCTGAGGAGGAGCGTTTTG
ATGACATGTCCTCTCCTGGTCTTGAACTTCCTCCATGTGA
ACTCTCCCGATTGGAGGAGGTGGCCGAGCTGGTGGCGTCA
TCCTTGCCTTCTCCGCTACGGCGGGAAAAGCTGGCCCTGG
CGCTGGAGAACGAGGGCTACATCCGCAAGCTGCTGGAGCT
TTTCCGCGTCTGCGAGGACTTAGAAAACAGAGAAGGTCTG
CATCACCTCTATGACATCATCAAAGGCATTTTCCTACTCA
ATCGCACGGCGCTCTTTGAAGTCATGTTCTCTGAAGAATG
CATCATGGATGTGATTGGCTGTCTGGAGTTTGATCCATCG
CTACCCCAACCACGGAGGCATCGGGAGTTCCTGACCACCA
CTGCACGCTTTAAAGAGGTCATTCCCATTTCGGACCCAGA
GCTGCGGCAGAAGATCCACCAGACGTACCGGGTGCAGTAT
ATTCAGGACATGGTGCTGCCCACTCCATCGGTCTTTGAAG
AAAACATGCTTTCCACCCTCCACTCCTTCATCTTCTTCAA
CAAAGTGGAGATTGTTGGCATGCTGCAGGATGATGAGAAG
TTTTTGACTGAGCTCTTTGCGCAGCTAACTGATGAAGCCA
CAGATGACGACAAACGGCACGAATTGGTAAACTTCCTGAA
GGAGTTTTGTGCGTTTTCACAAACGTTACAACCACAGAAC
AGAGATGCGTTCTTTAAAACCCTTTCCAACATGGGAATCC
TGCAAGCGCTGGAAGTTATTCTTGGCATGGATGATGTGCA
AGTGCGTGGAGCAGCCACTGATATCTTCTCCTACCTGGTG
GAGTACAACCCTTCTATGGTGCGAGAGTTTGTCATGCAGG
AGTCACAGCAGAATGATGATGACATTCTGTTGATAAATCT
GATCATTGAGCATATGATCTGTGACACGGATCCTGAGTTG
GGGGGAGCTGTTCAGCTTATGGGTTTGCTCAGGACGCTAG
TGGACCCAGAGAACATGCTAGCAACTGCTAATAAAACTGA
GAAGACCGAGTTTTTGAGCTTCTTCTATAAGCATTGCATG
CATGTGCTCTCCGCTCCACTTCTTGCCAACACCACTGAAG
AAAAACCCAGCAAAGATGATTTCCAGACATGTCAGCTGCT
GGCTCTGATCGTAGAGCTGCTCACTTTCTGCGTGGAGCAT
CACACGTATCACATAAAGAACTACATCATCAACAAAGACA
TCCTGCGCAGAGTGCTGGTGCTCACTGCATCACAACATGC
TTTCCTAGCCTTATGTGCTTTGCGTTTCATGAGAAAAATC
ATTGGCCTGAAGGATGAGTTTTATAACCGATACATTATGA
GGAACTTCCTGTTTGAGCCAGTGGTCAAAGCTTTCCTCAA
TAATGGATCCAGATACAACCTCATAAACTCAGCCATTATA
GAGATGTTTGAGTATGTCAGAGTGGAGGATGTGAAGTCAC
TGACGGCTCATATCATAGAGAACTACTGGAAGGGCCTGGA
GGACGTAGACTATGTTCAGACGTTTAAAGGACTAAAGCTC
CGATATGAACAGCAGAGAGAAAGACAGGACAACCCAAAAC
TTGACAGTATGCGGTCGATTCTGAGAAATCACCGTTTTCG
CCGGGATGCACGGACACTGGAAGACGAGGAGGAGATGTGG
TTTAATACGGATGAGGAAGACTTAGAGGATGGTGAAGCAG
TTGTGCCTCCGTCGGACAAGATGAAGAATGACGAGGACCT
TATGGATCCCATCAGCAAATTTATGGAGAGGAAAAAATTG
AAAGATTCAGAAGAGAAGGAGGTGTTGACAGGGAAAGCAA
GTCTCTCAGGACGGCAAAGTCCCAGTTTTAAACTGTCCTT
CTCCAGCTCGCCAAAGGCAAGCCTGTCCTCTCCGCCGACT
GCATCCCTTCATCCCGGTTCACCTGGTTCTCCTAGCTCTC
CCGGGACAGGGGCCCGGAGCTCTCCCCCTTCGGCAGCTGT
CACCACTAAGGGAGGTTTAGTGGGGCTGGTGGACTATCCT
GATGATGACGAAGAGGACGAGGATGAGGAAGATGCAGACA
GTAAAGAAGAAAGTCCTCCGCTGTCCAAGAAGTCCAAGCT
GAGCTCCTAAAAGCACTCCCTCCTCAATCAGCACAGTCAC
GCTCGAAGGGAGCTTCATCCAGAGACTTTTCCAGTGCTCA
GCCTAGAACTCAAACTGAAACTAAATGAATGATGATGAAT
ACACAAATGAATGGATAAATGAACGAATGCAGCCCCCCGC
AGGAGTCCACGGGGCGCCATGTGAGGAACGGAGGACAGGG
AGAGCAAGAGAGGGAGAAGATTCGGTCCCAGAACCAAAAG
GTGAATGTCTCCACGTGGAGTTTGTCCAAGTGCCAATCTG
CAAGAGAGAGAGAGAGAGACTCGTGAAGCGGACAGAGGGA
TGGAGGACTGTGGTCTGGACAAAGAATTATAATAAAATAA
GAAATTAATTTCGACAAAGCTAAAAGTTCTGGGGGGTAAA
ACAGACCTCACACGCAGTCCGTCAGTCAGTCGTTCACTCA
CAGACACTCGAACTGTTGCCCCACAGAGCGTCCCAGGCCT
GGACCAGGACACACTGCCCCCCCCTCTCAGGGAAGGACCT
CACATGACCCGAACTGGGCCAGCCAATCCACAACCACCAC
TCACCTTTGCTGATCTCCATCTCCATTTCTTTCTCTCCTT
CCTCCAGCTTTTTTTTCTGTTGTTTTTTTTCCCCCTTGTT
TTTGACTTTCTAGGGCCAGGCGGGACACTATAGGGAGCAA
AGAAGTCTGGGTCGTCATTGTTTAAGATGTCACTGTTGTT
CTTGTGGCTCAGCGGAAGTTCTTCCTCTTTCAAAGCCAGC
AGTTCCCTCCTTTTTCTTATTCTGTTGTTCTCCTCTCTGG
TTTTTTTAAAATGACACAAAGAGACCTGCCTTTAAATGTT
CAGGACGTTTTCAGCCGCACTTGAACAGGTTTTTAAAACC
TCAGTGGGGGGGAGATAGTTTTACCCTTTTTTTGCCCTTC
AAAACTGCAGATTTTTTGGAAAATTTGTAAGCCCGTCTTG
ATTAAAGATTGAGTGGAACTCTATAGATGTGATTGATTTC
TGTCATATCTTCATTTTTTTTTCTTTTCTTTTACTTGTGT
ACACTCTTAGTTGTTCAGTATATTTGGGACCATTAAAAGA
TCTTTGCTGTAGTAGATCTCTCCCGGTTGTGCTGGTTCCC
TGTATTATGTTCAACTGTGCTGATCTTTTTGTTATTTGAA
CTGGGATTTGGTCATTGAAATGATCCTCCTGTCTGCTCGT
CTGAATACGTCAATGGAGAAGCCGTGTCTCTGCTAAACAG
CCTGCACACAATTAAAGATAACAGTTTTTATTTTCTGAAA
AA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations