Transcript

ptprfa-202

ID
ZDB-TSCRIPT-090929-7177
Name
ptprfa-202 Nomenclature History
Previous Names
  • ptprf-001
  • ptprfa-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000168912 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000168912.2|gene_biotype:protein_coding|ENSDARG00000103479.2 transcript_biotype:protein_coding gene_symbol:ptprfa cdna chromosome:GRCz11:6:3166941:3273647:1
TGCCTGGTGCTCCTCCACGCAGGGTTGAGGTGGACAACAT
CAACTCCACTGCACTGCGTGTGTCCTGGAAGCCGCCTCTG
CAGCAGAAACAACACGGCCACATACGTGGATATCAGGTGG
TTTACTCACGCCTGGAGAATGGAGAGCCGCGCGGACAGCC
CATCATTCTGGACGTGGCGCTGCCAGAGGCACAGGAGGCC
GTGATCAGTGGTCTTCTCCCTGAAACCACATATTCAGTGA
CTGTAGCCGCGTACACCACTAAAGGAGATGGAGCGCGGAG
CAAAGCCAAAGTGGTGACCACAACAGGAGCAGGAAAGCCC
ACTATGATCATCAGCACCACCATAGGCAACACGGCTCTGA
TCCAGTGGCAGCCGCCTAAAGAGATGGTGGGAGAGCTGAT
GGGCTACAGACTCCGCTATAAGCGTGAAGAAGAGGATATT
TACACTGTCCGAGACTTCAGACGCACTGATGACCACTTCA
CTGTCACCGGCCTGCACAAGGGCGCGACGTACATCTTCAA
ACTCTGCGCTAAAAACCGCGCCGGGAATGGAGAGGAGTAC
AGCAAAGAGATCAGCACCCCGGAGGATGTGCCCAGCAGTT
ACCCACAAAACCTCAAAGTCGTTGGATTGACCACAACCAC
CACAAAACTAGCCTGGGATCCTCCGCCGCTGCCCGAGAGG
AATGGGAAGATCGTACGATATGTGGTGGTTTATCGAGACA
TTAACAGCCATCAGAATCAGACCAACGGCACAGCGGACAC
GGAGATGACCATTCAGGGCCTGAAGCCGGACACCACCTAT
GATATCAGGGTGAGGGCGTTTACAGGGAAAGGTGGAGGTC
CCATCAGCCCCAGCATCCAGAGCAGAACCATGTCTACCTC
CATGCCTGAGTTCACGAAAAACTTTGGTGTGAAAGCCGTG
ATGAAGACCTCTGTCCTGCTCACATGGGAGGTGCCAGAAA
CATACAAGTCTCAAGTGCCTTTCAAGATCCTGTATAACCA
GCAGAGTGTGGAGGTCCAGGGTGACCTGAAGAGGAAGCTG
ATTACGCGTCTGCAGCCGGACACTGATTACTCCTTTGTCC
TGATGAGTCGGGGGAACAGCGCTGGCGGACTGCAGCAGCA
GGTCTCCATCCGCACCGCTCCAGACCTGTTCACTACCAAA
CCAGCACACCAGAAACTAGACCCAGAGGAGGGCGGCAAAC
TCGCCATCACACTGCCCGAAGTGCACAACAGCGCCCTCGT
CAGGTGGTTTTATATCGTGGTTGTACCAGTAACTCCTTCA
ACTCTCCGCCATTGGGAAAACCCAGAAGATATTGATCTGG
ATGAGCTGATGGGGAATAATAGAGACGCAGCTGTGAGGAG
GAGGAGAAGACAAACTCAGGACTTTCTGCGGCCTTACATT
GCTGCCAAGCTGGAGTCTCTTCCAGAAAGATTTGTGTTGG
GAGATGAGAAAACCTACAGCAACTACTACAACAAACCTCT
GCCGGGACAGCAGCAGTATCGCACATTTATACTGGCGGCA
CTGAAAGACAGAGACTCGACGTTCACAGTGAGTCCGTTCT
CTGAGCCCATGATGGTGAAGCTCCACAGCGGGATGTCCCG
TCACGTGGAGGACCCGGAGATGCTGTGGGTGATGGGACCA
GTGTTAGCCGTGGTCCTCATCATCATCATCGTCATCGCCA
TCCTCCTCTTCAAGAGGAAGCGCACGTCTCCCTCAGCTAA
AGATGAGCACTCAGCTGGAGTTAAAGATCACCTGCTGGCT
CATTCGTCAGATCCAGTGGAGATGAGGAGGCTCAACTACC
AGACACAAGGAATGCGGGAACACCCTCCAGTGTCTGTGTG
TGCTTTGGCTGACCACATCGAGCGGCTGAGAGCCAACGAC
AGCCTCCGCTTCTCGCAGGAGTATGAGTCTGTTGACCCTG
GCCAGCAGTTCACCTGGGAAAACTCCAACTTAGAGGTCAA
CAAGCCCAAGAACCGCTACGCAAACGTCATCGCTTACGAT
CACTCCAGGGTTGTGCTGACTCCTGTGGATGGTGTTCCCG
GAAGTGACTACATCAATGGAAACTACATTGATGGCTACCG
TAAGCAGAACGCCTACATCGCCACGCAGGGTCCGCTGCCT
GAGACGCTCAGTGACTTCTGGAGGATGGTGTGGGAACAGA
GAACCAGCACTATCGTCATGATGACCCGACTGGAGGAGAA
GAGCAGGGTGAAGTGTGATCAGTACTGGCCAAGCCGAGGA
ACAGAGACTTACGGGATGATTCAAGTGTCCATGCTGGATA
CGGTGGAGCTGGCCACATACAGCGTCAGAACCTTCGCTCT
CTACAAGAATGGATCCAGCGAGAAACGGGAGGTTCGGCAG
TTCCAGTTCATGGCGTGGCCGGATCACGGTGTTCCCGAAT
ATCCCACACCCATTTTAGCCTTCTTACGCAGGGTCAAAGC
CTGCAACCCACCTGACGCGGGACCCATGGTGGTGCACTGC
AGCGCTGGCGTGGGTCGGACGGGCTGTTTCATCGTAATAG
ACGCCATGCTGGAGCGGATGAAGCACGAGAAGTCGGTGGA
CATCTACGGTCACGTGACCTGCATGCGTTCTCAGAGGAAC
TACATGGTGCAGACAGAGGATCAGTACATTTTCATTCACG
AGGCCCTGCTGGAGGCTGCCACCTGCGGGAACACAGAGGT
GCCGGCGCGGAGCCTCTACACACACATCCAGAAACTCACA
CAGGCGCCGCCTGGAGACACCGTCACCGCCATGGAGCTCG
AATTTAAGAAACTGGCCAACTCTAAAGCACACACCTCCAG
ATTCATCAGCGCTAGTCTGCCCTGCAACAAATTCAAGAAC
CGGCTGGTGAACATCATGCCTTTCGAGTCCAGCCGTGTTT
GTCTGCAGCCAATCAGAGGCGTGGAGGGCTCCGACTACAT
CAACGCCAGCTTCATCGACGGATACAGGCAGCAGAAGGCA
TATATCGCCACTCAAGGCCCGCTGTCTGAAACCACAGAGG
ACTTCTGGAGGATGCTTTGGGAGCACAACTCCACCATCGT
GGTGATGCTGACGAAGCTTAGAGAGATGGGACGGGAGAAA
TGTCATCAGTACTGGCCTGCAGAGAGATCTGCGCGCTACC
AGTATTTCGTTGTGGATCCTATGGCTGAATATAACATGCC
ACAGTACATCTTACGGGAGTTTAAAGTCACAGACGCCAGA
GATGGCCAGTCTCGGACTATCCGACAGTTTCAGTTCACAG
ATTGGCCGGAACAAGGTGTGCCAAAGACAGGAGAGGGCTT
TATTGATTTTATTGGTCAAGTCCACAAAACCAAGGAGCAG
TTTGGACAGGACGGACCAATTACTGTTCACTGCAGTGCCG
GTGTGGGCAGAACAGGCGTCTTCATCACTTTAAGTATTGT
TCTGGAGCGGATGAGGTATGAAGGAGTGGTGGACATGTTC
CAGACCATAAAAACACTCCGCACGCAGAGACCTGCCATGG
TACAGACCGAGGACCAGTACCAGCTGTGCTACAGAGCAGC
TCTGGAGTACCTGGGCAGCTTCGATCACTATGCAACGTAA
CCACTCCCAGAATGCCTCAGCACGTCACTTCCGGAGGGCC
GCCGCTTATTTCTGAGCCATAGTCATTCTACCTGTTCGAT
CACACTGCTAGAGAGAGAAAGAGAGAGAGAGACAGACAGA
ATGAGAATATATCAGAGGAGAGAAGACATCACAGGACATC
TTCACTGGAACTTCTCTGCAATCCTGTTTGGTCCTCTCTC
TGGAAACATACAACCACAAAAGCAGCTTCATTCTGCTCTC
TGATGCACAGCTCTCTATTACTGCTTCATCATCATGATCT
TTTCTTCCATATCGATGCTTGTTTTTATCATTATTATTAT
CATCATTATTTTTATTGTATCATCATTATGATTGGTATAT
TTGTCAGAAAATACAATATTTGTATCATTTATGCTGATCG
TTGCATATCTATGGGGGTCTTATTTTTCTTATATTATCAT
TTTTGGTATTTTATTTTTAGCACATACATGTGGACATGTA
T

OTTDART00000024309 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000024309|OTTDARG00000019711|ZDB-GENE-020107-2 ptprfa|OTTDARP00000020095 ptprf-001 LG_none BX255959.11,BX119315.5 Danio rerio protein_coding KNOWN, 4041 bp
TGCCTGGTGCTCCTCCACGCAGGGTTGAGGTGGACAACAT
CAACTCCACTGCACTGCGTGTGTCCTGGAAGCCGCCTCTG
CAGCAGAAACAACACGGCCACATACGTGGATATCAGGTGG
TTTACTCACGCCTGGAGAATGGAGAGCCGCGCGGACAGCC
CATCATTCTGGACGTGGCGCTGCCAGAGGCACAGGAGGCC
GTGATCAGTGGTCTTCTCCCTGAAACCACATATTCAGTGA
CTGTAGCCGCGTACACCACTAAAGGAGATGGAGCGCGGAG
CAAAGCCAAAGTGGTGACCACAACAGGAGCAGGAAAGCCC
ACTATGATCATCAGCACCACCATAGGCAACACGGCTCTGA
TCCAGTGGCAGCCGCCTAAAGAGATGGTGGGAGAGCTGAT
GGGCTACAGACTCCGCTATAAGCGTGAAGAAGAGGATATT
TACACTGTCCGAGACTTCAGACGCACTGATGACCACTTCA
CTGTCACCGGCCTGCACAAGGGCGCGACGTACATCTTCAA
ACTCTGCGCTAAAAACCGCGCCGGGAATGGAGAGGAGTAC
AGCAAAGAGATCAGCACCCCGGAGGATGTGCCCAGCAGTT
ACCCACAAAACCTCAAAGTCGTTGGATTGACCACAACCAC
CACAAAACTAGCCTGGGATCCTCCGCCGCTGCCCGAGAGG
AATGGGAAGATCGTACGATATGTGGTGGTTTATCGAGACA
TTAACAGCCATCAGAATCAGACCAACGGCACAGCGGACAC
GGAGATGACCATTCAGGGCCTGAAGCCGGACACCACCTAT
GATATCAGGGTGAGGGCGTTTACAGGGAAAGGTGGAGGTC
CCATCAGCCCCAGCATCCAGAGCAGAACCATGTCTACCTC
CATGCCTGAGTTCACGAAAAACTTTGGTGTGAAAGCCGTG
ATGAAGACCTCTGTCCTGCTCACATGGGAGGTGCCAGAAA
CATACAAGTCTCAAGTGCCTTTCAAGATCCTGTATAACCA
GCAGAGTGTGGAGGTCCAGGGTGACCTGAAGAGGAAGCTG
ATTACGCGTCTGCAGCCGGACACTGATTACTCCTTTGTCC
TGATGAGTCGGGGGAACAGCGCTGGCGGACTGCAGCAGCA
GGTCTCCATCCGCACCGCTCCAGACCTGTTCACTACCAAA
CCAGCACACCAGAAACTAGACCCAGAGGAGGGCGGCAAAC
TCGCCATCACACTGCCCGAAGTGCACAACAGCGCCCTCGT
CAGGTGGTTTTATATCGTGGTTGTACCAGTAACTCCTTCA
ACTCTCCGCCATTGGGAAAACCCAGAAGATATTGATCTGG
ATGAGCTGATGGGGAATAATAGAGACGCAGCTGTGAGGAG
GAGGAGAAGACAAACTCAGGACTTTCTGCGGCCTTACATT
GCTGCCAAGCTGGAGTCTCTTCCAGAAAGATTTGTGTTGG
GAGATGAGAAAACCTACAGCAACTACTACAACAAACCTCT
GCCGGGACAGCAGCAGTATCGCACATTTATACTGGCGGCA
CTGAAAGACAGAGACTCGACGTTCACAGTGAGTCCGTTCT
CTGAGCCCATGATGGTGAAGCTCCACAGCGGGATGTCCCG
TCACGTGGAGGACCCGGAGATGCTGTGGGTGATGGGACCA
GTGTTAGCCGTGGTCCTCATCATCATCATCGTCATCGCCA
TCCTCCTCTTCAAGAGGAAGCGCACGTCTCCCTCAGCTAA
AGATGAGCACTCAGCTGGAGTTAAAGATCACCTGCTGGCT
CATTCGTCAGATCCAGTGGAGATGAGGAGGCTCAACTACC
AGACACAAGGAATGCGGGAACACCCTCCAGTGTCTGTGTG
TGCTTTGGCTGACCACATCGAGCGGCTGAGAGCCAACGAC
AGCCTCCGCTTCTCGCAGGAGTATGAGTCTGTTGACCCTG
GCCAGCAGTTCACCTGGGAAAACTCCAACTTAGAGGTCAA
CAAGCCCAAGAACCGCTACGCAAACGTCATCGCTTACGAT
CACTCCAGGGTTGTGCTGACTCCTGTGGATGGTGTTCCCG
GAAGTGACTACATCAATGGAAACTACATTGATGGCTACCG
TAAGCAGAACGCCTACATCGCCACGCAGGGTCCGCTGCCT
GAGACGCTCAGTGACTTCTGGAGGATGGTGTGGGAACAGA
GAACCAGCACTATCGTCATGATGACCCGACTGGAGGAGAA
GAGCAGGGTGAAGTGTGATCAGTACTGGCCAAGCCGAGGA
ACAGAGACTTACGGGATGATTCAAGTGTCCATGCTGGATA
CGGTGGAGCTGGCCACATACAGCGTCAGAACCTTCGCTCT
CTACAAGAATGGATCCAGCGAGAAACGGGAGGTTCGGCAG
TTCCAGTTCATGGCGTGGCCGGATCACGGTGTTCCCGAAT
ATCCCACACCCATTTTAGCCTTCTTACGCAGGGTCAAAGC
CTGCAACCCACCTGACGCGGGACCCATGGTGGTGCACTGC
AGCGCTGGCGTGGGTCGGACGGGCTGTTTCATCGTAATAG
ACGCCATGCTGGAGCGGATGAAGCACGAGAAGTCGGTGGA
CATCTACGGTCACGTGACCTGCATGCGTTCTCAGAGGAAC
TACATGGTGCAGACAGAGGATCAGTACATTTTCATTCACG
AGGCCCTGCTGGAGGCTGCCACCTGCGGGAACACAGAGGT
GCCGGCGCGGAGCCTCTACACACACATCCAGAAACTCACA
CAGGCGCCGCCTGGAGACACCGTCACCGCCATGGAGCTCG
AATTTAAGAAACTGGCCAACTCTAAAGCACACACCTCCAG
ATTCATCAGCGCTAGTCTGCCCTGCAACAAATTCAAGAAC
CGGCTGGTGAACATCATGCCTTTCGAGTCCAGCCGTGTTT
GTCTGCAGCCAATCAGAGGCGTGGAGGGCTCCGACTACAT
CAACGCCAGCTTCATCGACGGATACAGGCAGCAGAAGGCA
TATATCGCCACTCAAGGCCCGCTGTCTGAAACCACAGAGG
ACTTCTGGAGGATGCTTTGGGAGCACAACTCCACCATCGT
GGTGATGCTGACGAAGCTTAGAGAGATGGGACGGGAGAAA
TGTCATCAGTACTGGCCTGCAGAGAGATCTGCGCGCTACC
AGTATTTCGTTGTGGATCCTATGGCTGAATATAACATGCC
ACAGTACATCTTACGGGAGTTTAAAGTCACAGACGCCAGA
GATGGCCAGTCTCGGACTATCCGACAGTTTCAGTTCACAG
ATTGGCCGGAACAAGGTGTGCCAAAGACAGGAGAGGGCTT
TATTGATTTTATTGGTCAAGTCCACAAAACCAAGGAGCAG
TTTGGACAGGACGGACCAATTACTGTTCACTGCAGTGCCG
GTGTGGGCAGAACAGGCGTCTTCATCACTTTAAGTATTGT
TCTGGAGCGGATGAGGTATGAAGGAGTGGTGGACATGTTC
CAGACCATAAAAACACTCCGCACGCAGAGACCTGCCATGG
TACAGACCGAGGACCAGTACCAGCTGTGCTACAGAGCAGC
TCTGGAGTACCTGGGCAGCTTCGATCACTATGCAACGTAA
CCACTCCCAGAATGCCTCAGCACGTCACTTCCGGAGGGCC
GCCGCTTATTTCTGAGCCATAGTCATTCTACCTGTTCGAT
CACACTGCTAGAGAGAGAAAGAGAGAGAGAGACAGACAGA
ATGAGAATATATCAGAGGAGAGAAGACATCACAGGACATC
TTCACTGGAACTTCTCTGCAATCCTGTTTGGTCCTCTCTC
TGGAAACATACAACCACAAAAGCAGCTTCATTCTGCTCTC
TGATGCACAGCTCTCTATTACTGCTTCATCATCATGATCT
TTTCTTCCATATCGATGCTTGTTTTTATCATTATTATTAT
CATCATTATTTTTATTGTATCATCATTATGATTGGTATAT
TTGTCAGAAAATACAATATTTGTATCATTTATGCTGATCG
TTGCATATCTATGGGGGTCTTATTTTTCTTATATTATCAT
TTTTGGTATTTTATTTTTAGCACATACATGTGGACATGTA
T

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations