Transcript

hnrpkl-204

ID
ZDB-TSCRIPT-090929-22543
Name
hnrpkl-204 Nomenclature History
Previous Names
  • hnrpkl-002
  • ottdart00000040008
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000139236 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000139236.2|gene_biotype:protein_coding|ENSDARG00000007034.12 transcript_biotype:nonsense_mediated_decay gene_symbol:hnrpkl cdna chromosome:GRCz11:5:55604253:55625239:-1
AGACAGAAGGCGTAGAATTTTCGGGTGAAAATTGGTGTGA
CGGAAGGGCTGCCTGCAGAGTTACTCGTCGAGGACAGCCT
ATTCCAGTTTCACGGCTGGCTGAAGACAATGGAGACAGAA
ATTGAGCAGCAGGACGAAGATACCACTTTCAGTAACACTG
ACACTAACGGCAAGCGCCCTGCTGAGGACATGGATGAGGA
ACAGGCATTCAAACGCTCCCGCAATACAGATGAAATGGTA
GAACTCAGGGTGCTTCTCCAGAGCAAAAATGCAGGGGCTG
TGATTGGAAAGGGAGGCAAGAACATTAAAGCTTTACGCAC
AGATTATCCTGAGTGTGAGTGCAGATATAGACACCATTGG
TGAAATTCTGCTGAAGATCATCCCGACTCTGGAGGAGTAT
CAGCACTACAGCGGAACTGATTTTGACTGTGAGCTGCGTC
TGCTGATTCATCAGAGTCTGGCTGGAGGCATTATTGGGGT
CAAAGGTGCCAAAATCAAAGAACTGAGAGAGGACGGCGAC
CTATGGGTGGGTTCCCAATGAGAGGCAGAGGAGGATTTGA
TCGAATGCCTCCTGGTCGTGGCAGTCGGTCGGTCCCCCCT
TCCAGACGTGATTATGATGATATGAGCCCACGCCGTGGAC
CACCTCCACCACCACCCGGGAGAGGAGGACGTGGTGGCAG
TAGGGCCCGAAATTTGCCTCTGCCCCCACCACCGCCGCCT
AGAGGAGGTGATCGGTTTTCCCACCAGAGTTACCACAGCA
ATATGGACGACAGACCAAATGACCGAAGGGGGCGGCCTGG
AGATCGCTATGAAAGCATGAGTGGAGGTGGATATGGTGGT
AGAGGTTCTTACAGCGACATCGGTGGGCCTGTCATTACAA
CACAAGTGACCATCCCTAAAGATCTGGCTGGCTCCATCAT
TGGGAAAGGCGGACAGAGGATCAAGCAGATTCGTCATGAG
TCAGGAGCATCTATTAAAATCGATGAGCCTCTGGAGGGCT
CAGAGGACAGGATCATTACCATCACAGGTACACAGGACCA
GATTCAGAACGCCCAGTATCTACTACAGAACAGCGTGAAG
CAGTACTCTGGACGCTTCTTCTAGAGGATGGAGACTGAAG
CCAAACTGCCATACCCATTCACTTCAACTTGTTTTCAGAG
CCTACATTCCTCTGCTTCTTGGGTAGATGTGCTCCCTGCC
ATTTTCTCCTAACAATTTTTTTTTTGAAGCAACACATTTG
AAAGAAAAGTTTTTTTTTTCTGTTAAAAGCAAGTGGATCC
TCTTTTTTTCCTTTAACATTATCTTTCTGCACGCAAATGT
TTTCCATTTATTGATTGTACTGTTTGGTATATAGAGGGAG
CCCATCTGTGATGTCCACTGTTGGCCTTACCAGAGCTGCA
TGCTAAGTCTGCAACATGCAGAATGTCTTTTTTTTTTTTT
TTATTTGGCCAATGAATTTGAATTGCCCCATTATCATCTT
GACTTCATGATTAGACGTTTGGGTGAAGTGTAAATACTGT
TTTTTTTTATTTTTTATTTTTTTTATTTAAAGGAAGAACA
TCTATTTTGATTTGAAAAATGG

OTTDART00000040008 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000040008|OTTDARG00000029201|ZDB-GENE-040426-1923 hnrpkl|OTTDARP00000031979 hnrpkl-002 LG_ CU468920.7 Danio rerio protein_coding KNOWN, 1582 bp
AGACAGAAGGCGTAGAATTTTCGGGTGAAAATTGGTGTGA
CGGAAGGGCTGCCTGCAGAGTTACTCGTCGAGGACAGCCT
ATTCCAGTTTCACGGCTGGCTGAAGACAATGGAGACAGAA
ATTGAGCAGCAGGACGAAGATACCACTTTCAGTAACACTG
ACACTAACGGCAAGCGCCCTGCTGAGGACATGGATGAGGA
ACAGGCATTCAAACGCTCCCGCAATACAGATGAAATGGTA
GAACTCAGGGTGCTTCTCCAGAGCAAAAATGCAGGGGCTG
TGATTGGAAAGGGAGGCAAGAACATTAAAGCTTTACGCAC
AGATTATCCTGAGTGTGAGTGCAGATATAGACACCATTGG
TGAAATTCTGCTGAAGATCATCCCGACTCTGGAGGAGTAT
CAGCACTACAGCGGAACTGATTTTGACTGTGAGCTGCGTC
TGCTGATTCATCAGAGTCTGGCTGGAGGCATTATTGGGGT
CAAAGGTGCCAAAATCAAAGAACTGAGAGAGGACGGCGAC
CTATGGGTGGGTTCCCAATGAGAGGCAGAGGAGGATTTGA
TCGAATGCCTCCTGGTCGTGGCAGTCGGTCGGTCCCCCCT
TCCAGACGTGATTATGATGATATGAGCCCACGCCGTGGAC
CACCTCCACCACCACCCGGGAGAGGAGGACGTGGTGGCAG
TAGGGCCCGAAATTTGCCTCTGCCCCCACCACCGCCGCCT
AGAGGAGGTGATCGGTTTTCCCACCAGAGTTACCACAGCA
ATATGGACGACAGACCAAATGACCGAAGGGGGCGGCCTGG
AGATCGCTATGAAAGCATGAGTGGAGGTGGATATGGTGGT
AGAGGTTCTTACAGCGACATCGGTGGGCCTGTCATTACAA
CACAAGTGACCATCCCTAAAGATCTGGCTGGCTCCATCAT
TGGGAAAGGCGGACAGAGGATCAAGCAGATTCGTCATGAG
TCAGGAGCATCTATTAAAATCGATGAGCCTCTGGAGGGCT
CAGAGGACAGGATCATTACCATCACAGGTACACAGGACCA
GATTCAGAACGCCCAGTATCTACTACAGAACAGCGTGAAG
CAGTACTCTGGACGCTTCTTCTAGAGGATGGAGACTGAAG
CCAAACTGCCATACCCATTCACTTCAACTTGTTTTCAGAG
CCTACATTCCTCTGCTTCTTGGGTAGATGTGCTCCCTGCC
ATTTTCTCCTAACAATTTTTTTTTTGAAGCAACACATTTG
AAAGAAAAGTTTTTTTTTTCTGTTAAAAGCAAGTGGATCC
TCTTTTTTTCCTTTAACATTATCTTTCTGCACGCAAATGT
TTTCCATTTATTGATTGTACTGTTTGGTATATAGAGGGAG
CCCATCTGTGATGTCCACTGTTGGCCTTACCAGAGCTGCA
TGCTAAGTCTGCAACATGCAGAATGTCTTTTTTTTTTTTT
TTATTTGGCCAATGAATTTGAATTGCCCCATTATCATCTT
GACTTCATGATTAGACGTTTGGGTGAAGTGTAAATACTGT
TTTTTTTTATTTTTTATTTTTTTTATTTAAAGGAAGAACA
TCTATTTTGATTTGAAAAATGG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations