Transcript

clockb-003

ID

ZDB-TSCRIPT-090929-21478

Name

clockb-003 Nomenclature History

Previous Names

clock3-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

clockb (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000133758 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000133758.2|gene_biotype:protein_coding|ENSDARG00000003631.10 transcript_biotype:retained_intron gene_symbol:clockb cdna chromosome:GRCz11:1:19458980:19462463:1
AGTTGGAGGAGCACAGAACAACATTTTAGGCATTGGGACT
CAGGCTAGCGTTGTAGCGATACAGGGCCAAAATGTGACAA
GTACAGCGCACAGCGGATCTGCTCCACAGCAGCAAACACT
TCCACAGCAACAGACTCCTCGATCCCTGCAGCAGAATCTA
CAGAGCTCTTCTGTAACTCAGTGCGGTCCTGTGTATAATA
CCATGATGATCAGCCAACCTGCCAATGCCAATGTTGTGCA
GATACCCAGCAATCTGGCACCGAAAATCAGTCAAGCCAAT
GCAATTAACAGGTTTCCAGCCGGGCAGCAGTTGGTCACAA
AGATTGTGACGGCTCCAATGGCGTGTGGCGCAGTCATGGT
GCCCACGTCGATGTTTATGGGTCAGGTGGTGACCGCGTAC
AGTCCGTTTACACAACAACAGGGTCAGACGCAGACCATAA
CACTGCAGACGCAGCCCACCGTGCCTGCAGACCAGCAGAC
TCAGGCTGCCACATTACAGAGTCAACAGCAGGGGGCGACA
CAGCAGTCAACAAAACAGCAGCAACCCTTTTTACAGGTAA
CAAAGTTCACACTGTAGTGGGGTTCAGTGACACGTGCATC
ACTTCCAACAGTAACACCCTGTTCTTAGCACTCGTTTTTA
TATTTGCCACATCTCAGTTTTGAGCGTAGCAGACGGATGC
ACTGGGTAGGCATGGGCTGGTATAAGATTCTGACAGTATG
ATAACCTTGGATAAAAATATCACGGTTTGATGGTATTGTG
ATCACTGCTCTAAAATATGTTCTTTTTAAATGTCTAAGTA
AAAAACAAAAGCTT

OTTDART00000041426 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041426|OTTDARG00000030051|ZDB-GENE-030408-2 clockb|no_translation clock3-003 LG_none BX901913.8,CR926462.3,BX548248.10 Danio rerio protein_coding KNOWN, 814 bp
AGTTGGAGGAGCACAGAACAACATTTTAGGCATTGGGACT
CAGGCTAGCGTTGTAGCGATACAGGGCCAAAATGTGACAA
GTACAGCGCACAGCGGATCTGCTCCACAGCAGCAAACACT
TCCACAGCAACAGACTCCTCGATCCCTGCAGCAGAATCTA
CAGAGCTCTTCTGTAACTCAGTGCGGTCCTGTGTATAATA
CCATGATGATCAGCCAACCTGCCAATGCCAATGTTGTGCA
GATACCCAGCAATCTGGCACCGAAAATCAGTCAAGCCAAT
GCAATTAACAGGTTTCCAGCCGGGCAGCAGTTGGTCACAA
AGATTGTGACGGCTCCAATGGCGTGTGGCGCAGTCATGGT
GCCCACGTCGATGTTTATGGGTCAGGTGGTGACCGCGTAC
AGTCCGTTTACACAACAACAGGGTCAGACGCAGACCATAA
CACTGCAGACGCAGCCCACCGTGCCTGCAGACCAGCAGAC
TCAGGCTGCCACATTACAGAGTCAACAGCAGGGGGCGACA
CAGCAGTCAACAAAACAGCAGCAACCCTTTTTACAGGTAA
CAAAGTTCACACTGTAGTGGGGTTCAGTGACACGTGCATC
ACTTCCAACAGTAACACCCTGTTCTTAGCACTCGTTTTTA
TATTTGCCACATCTCAGTTTTGAGCGTAGCAGACGGATGC
ACTGGGTAGGCATGGGCTGGTATAAGATTCTGACAGTATG
ATAACCTTGGATAAAAATATCACGGTTTGATGGTATTGTG
ATCACTGCTCTAAAATATGTTCTTTTTAAATGTCTAAGTA
AAAAACAAAAGCTT

Related Transcripts

Transcripts related to clockb

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	clockb-201 (1) Ensembl	Ensembl	2,947 nt	Select Tool ZFIN BLAST
mRNA	clockb-203 (1) Ensembl	Ensembl	3,297 nt	Select Tool ZFIN BLAST
ncRNA	clockb-002 (1) Ensembl	Ensembl	773 nt	Select Tool ZFIN BLAST
ncRNA	clockb-003	Ensembl	814 nt
ncRNA	clockb-004 (1) Ensembl	Ensembl	635 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations