Transcript

abca1a-202

ID
ZDB-TSCRIPT-090929-21183
Name
abca1a-202 Nomenclature History
Previous Names
  • abca1a-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
OTTDART00000041102 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000041102|OTTDARG00000029861|ZDB-GENE-031006-12 abca1a|OTTDARP00000032835 abca1a-001 LG_ BX004781.7 Danio rerio protein_coding KNOWN, 9428 bp
ATGGCTGTCTCCACTCAGTTGGGTTTACTGTTGTGGAAGA
ACTTCACCTACAGACGGAGACAGACTATTCAGCTGCTGGT
CGAGATCATATGGCCACTTTTCATCTTTTTCATCTTGATA
TCTGTCAGACTCTACTATCCGCCATACGAGCAACATGAAT
GCCATTTTCCCAATAAGGCTATGCCCTCTGCAGGGACTTT
ACCGTGGGTTCAGGGCATCATCTGCAATGCCAACAACCCC
TGCTTTCGCTACCCGACTCCAGGAGAGACGCCCGGGGTTG
TGGGCAACTTCAATGACTCCATCATCTCCCGACTGTTCAC
CGATGCCAAGAAAATTCTCCTCTACAGCCAACAAGACAAG
AGCTTCGAAGGTTTCAAAGGACTCGTTCGAGCCTTGAGAA
AACTGCAGAGAAACACTGAAGGTTTCAAACTGAAGGATTT
CCTCCATGATAATGAAACGCTGTCTGCCTTTCTGGAGAAA
AATGCCACCCTGCCCAAGCATGCAGTGAGACAGATAGTGG
AGGCCAACGTCAACTTGGAGAAGGTGCTTATTAAAGGATT
CGGCGTTCATCTTACAGACCTGTGCAATTCCACGTCTCTG
GAAGAGTTTGTGACTATAGCCGATAAAGACGTGTCTCAAC
TGACGCAAAACATCATCTGCCAGTCGCCCGCTGATTGGCT
GAACAACGCAGAGCAACACTTCCTGTCCAACCTGGACTTC
CTGAAGCCCATTCGGAAAGATGTCAAGTCAGACCCAAAGA
TCATCAAAGATGTGTCCATTGCTACAGACAGTCTGCTGGA
GAGTCTGGGGGCTTTGGCAGTGGAGTTGGCGAGTATGAAG
AGCTGGCGCGACATGCGGAATGAGATCCTCTACCTGACGG
GCAACAGCACGCAGTCACCAAACCACATGTACCAGGCCGT
GTCCCGCATCGTCTGCGGCCATCCGGAGGGTGGCGGATTA
AAGATCAAGTCCCTCAACTGGTTCGAAGACAATAACTACA
AAGCCCTGTTCGGAAACAATGGCAACGACAGTGACAGCGA
GCCCGCATCTGTTTACGACAACTCCTCCACGCCGTACTGC
AACAACCTGATGAAGGGTCTTGAGTCGAGTCCCATTTCCC
GCATGATCTGGAGGGCCCTGAAACCGCTGCTCATGGGAAA
GATCTTGTACACACCAGACACTCCGGCCACACAGAGGATC
ATACATGAGGTCAATAAGACGTTTCAGGAGCTCGGTGTAC
TCCGTGACCTCGGCGGCATGTGGGAAGAAATGAGACCCAA
AATCTGGAACTTCATGGAGAACAGTGAGGAGATGGACCTC
GTCCGGACGCTGCTCCAGAATAACGCCAGCGCTCGTTTCT
TCAATGCTAAGCTGAGCGGGACAGAATGGCGCGTGGAGGA
TGTGTCCCGCTTCTTGTCCAAGTCTTCAGAGGACACTCGT
CCACATGGGACAGCGTACACATGGAGAGAAGTGTTCAACG
AGACTGACCAGGCCATACAGACCATCTCCCGCTTCATGGA
GTGTGTGAACTTGGATAAGTTGGAGCCGGTGGCGAACGAG
GAGCGTCTGGTCAATAAATCCATGCGTCTGCTGGATGACC
GCAAGTTTTGGGCAGGAATCGTGTTTCCCGACATGCAATC
CAACACGTCTGATCTGCCACTCAACGTTAACTATAAGATC
CGCATGGACATCGATAACGTGGAGCGAACCAATAAGATCA
AGGACGGATATTGGGATCCGGGTCCTCGAGCTGACCCATT
TGAGGACTTGCGTTACATCTGGGGCGGCTTCACATACCTG
CAGGACGTGATTGAGCACGGGATCATCAGAGCTCTGACCG
GCAGCAAGGAAAAAACCGGAGTCTACATCCAGCAGATGCC
GTATCCCTGCTATGTGGATGACATTTTCCTGCGGGTCATG
AGCCGCTCCATGCCTCTCTTCATGACTCTGGCCTGGATGT
ACTCGGTGGCCATCATCATCAAGGGTGTGGTGTATGAAAA
AGAGGCCCGACTCAAGGAGACCATGCGGATCATGGGTCTG
GATAACGGCATCTTGTGGCTGAGCTGGTTCATCAGCAGCC
TGATACCACTGCTCATCAGCGCCGCCCTGCTGGTGCTCAT
CCTGAAGATGGGGAATCTCCTGCCGTACAGCGACCCCGGC
GTCATCTACTTGTTCTTGTCCTCTTTTGCGGTGGTGACCA
TCATGCAGTGTTTCCTGATCAGCACACTCTTCTCTCGTGC
CAATCTTGCCGCCGCCTGCGGAGGCATCATTTACTTCACG
CTTTACCTGCCCTATGTGCTCTGCGTCGCCTGGCAGAACT
ACGTGGGCTTCGGTGCCAAAATAGTAGTGAGTCTGCTGTC
TCCAGTGGCGTTCGGCTTCGGCTGTGAGTATTTCGCTCTG
TTTGAGGAGCAGGGTGTGGGCATCCAGTGGAGTAATCTGC
TGTCCAGCCCCATGCAGGAGGACAGCTACAACCTGACCAC
CTCCATCTGCCTCATGCTCTTCGATTCGGTGCTCTACGCC
GTCATGACCTGGTACATCGAGGCCGTCTTTCCAGGTCAGT
ATGGCATCCCTCGACCCTGGTACTTCCCTTTCACCAAGTC
ATACTGGTGCGGAGAGAAATGCGGATGGACAACATCAGTG
CCAAGTAACAGGAAAGAAAACGCGGAAGCTGTGTGCATTG
AGGAAGAGCCAGCCCATATAGATCCTGGTGTTTACATCGA
GAACCTGATGAAGATCTACAGCAATGGTAAAGTGGCAGTG
GACGGTTTGACTCTGGGCTTTTATGAGGGCCAGATCACTT
CTTTCCTTGGCCACAACGGCGCTGGAAAAACCACAACCAT
GTCAATCCTCACCGGCCTGTTTCCACCGACTTCTGGCACT
GCGTACATCCAGGGCAAAGACATCCGCACAGACCTGAATG
CCATCCGCCAAAACCTGGGCGTCTGTCCTCAGCATAACGT
CCTGTTCAGCATGCTGACCGTGGAGGAGCACATCTGGTTT
TATGCGCGTCTGAAGGGTTTGTCTGCGGAGAAGGTGAAGT
CTGAGATGGAGCAGATCGTGATGGACCTCGGCCTTCCTCA
TAAACGCACATCTCGCTCCAACCAGCTCTCAGGAGGAATG
CAGAGGAAGTTATCAGTCGCGCTGGCCTTCGTCGGAGGCT
CAAAAGTGGTGATTCTGGATGAACCGACTGCTGGAGTTGA
TCCTTACGCCCGCCGTGGCATCTGGGACCTGCTGCTGAAA
TACCGCCAAGGTCGCACCATCATCCTGTCCACACACCACA
TGGATGAAGCCGATATACTGGGCGACCGCATCGCCATCAT
CTCTCATGGCAAGCTGTGCTGCGTGGGCTCCTCTCTGTTC
CTCAAGACTCAGCTGGGCACGGGTTACTACCTGACGCTGG
TCAAGAAAGACTTCGATCTGTCCGCCAGCTCCTGCCGCAC
CTCCAGCAGCACGGTCTCCTACTCCAAGGGAAGCCTCAAG
AAGGATGACAGCGTATCTGAGAGCAGTTCTGATGCCGGAC
TGGGCAGCGACCATGAAAGCGAAACCACCACCATCGACAT
CTCCTTGATCTCCAATGTGATCTTCAAGCACGTTCCTACA
GCCAGACTGGTGGAGGATCTCGGCCACGAAATCACGTACG
TTCTGCCATATGAATCTGCCAAAGATGGAGCATTCGTGGA
GCTTTTCCACGAGATCGACGACCGGCTCACAGACCTCAGC
ATCTCCAGCTACGGCATCTCGGACACCACTCTCGAAGAGA
TTTTCCTGAAAGTGGCTGAGGACTGCGGTGTGGATGCTGA
AACCTCAGACGGGACTCTGCCTGCACGCAGGAACCGCAGA
CATGCATTCGGGGACCATCAGAGCTGCTTGAAGCCTTTTA
CTGAAGACGACTTTGATTTCAACGACTCTGAAGGGGATCC
AGAGTCTCGTGAGACTGACTGGTTGGATGGTGCTGATGGT
AAAGGCTCGTATCAGGTGAAGGGCTGGAGTCTGAAGCGGC
AGCAGTTTGTGGCTTTGCTCTGGAAACGTTTACTGTACGC
CCGACGCTCACGCAAAGGTTTCTTTGCTCAGATTGTGCTT
CCCGCTGTGTTCGTGTGCATCGCTCTGGTCTTCAGCCTCA
TCGTTCCTCCTTTCGGGAAATATCCCAGCCTCGCTCTGGA
GCCCAGCATGTATGAGGAGCAGTTCACCTTTATCAGTAAT
GACGCACCAGAAGACAGACACACAAACAGGCTGCTTGATG
CTCTGAAGGACAGTCCGGCTTATACTGACCAGTGCACAGA
TGGGAAAAACACAGCTAGCAGATCGTGTCCGATTAAAGAT
GGAGAATGGCTGGTTCCAGAGGTTACCGAGAGCATTGAGG
CAATATTCCTGAATGGAAACTGGAGTATGGAAAACCCTTC
TCCTCTGTGTGAGTGCAGCTGTGAAGGACGGAAAAAGATG
CTTCCGGAGTGTCCGCCTGGAGCAGGAGGCCTTCCACCGC
CTCAGATTAAAGTCACCCATGATGAAACCCTGCAGAATCT
GTCTGGAAGAAACATTTCAGACTATTTGGTGAAAACATAC
GCACAGATTATTGGGAAAAGTTTGAAGAACAAGCTCTGGG
TCAACGAATTCAGATATGGTGGCTTCTCATTGGGTGCACG
AAACACACAGGCTCTCCCACCTGGCGATGAGCTCACTGAT
GCCATCTCTCACATCCGCAGCCGCTTCAGTCTTGAGTCGG
GCACCGCAGCCGACCGCTTTCTGGGAAGCCTGTCAACTTT
TATCCGAGGTCTGGATACCAATAACAATGTGAAGATCTGG
TTCAATAATAAAGGCTGGCACAGTATCGGATCATTCCTCA
ACGTCATGAACAATGCCGTCCTGCGTGCTAATCTTCCTCC
CGGCCTGGATCGCTCCAAATTTGGCATCAACGCATTTAAC
CATCCACTCAACCTCACCAAAGAGCAGCTCTCGCATGTGG
CACTAATGACCACCTCGGTGGATGTGCTGGTGTCCATCTG
CGTCATCTTCGCCATGTCCTTCGTTCCAGCCAGTTTCGTG
GTGTTCCTCATCCAGGAGAGAGTGAATAAAGCCAAACACA
TGCAGTTCATCAGCGGAGTGCAGCCGTTTCTCTACTGGCT
GGCCAACTTTGTCTGGGACATGTGCAACTACATTGTCCCG
GCGACTCTGGTGATCATCATCTTCGTCTGTTTCCAACAAG
AGGCATATGTGTCTTCGACAAACCTGCCGGTTCTTGCTCT
TCTGCTGCTTCTGTATGGATGGTCCATAACGCCCCTGATG
TACCCAGCTTCATTCTTCTTCAAGATCCCAAGTACAGCAT
ATGTGGTTCTGACCAGCGTCAACATCCTCATTGGGATAAA
CGGCAGCGTATCCACATTCGTCCTGGAGCTTTTCGGCAGC
AATGAGATCGGCGGCATCAATGACATCTTGAAGAACGTGT
TTCTGATCTTCCCTCATTTCTGTCTGGGTCGAGGACTCAT
TGATATGGTGAAGAACCAAGCTATGGCTGACGCGCTGGAG
CGATTCGGAGAGAATCGTTTCCGCTCTCCTCTGGCGTGGG
ACATGGTGGGCAAGAATCTGTTCGCTATGGCCATCGAGGG
CGTGATTTTCTTCAGCATCACCGTCCTCATCCAGTACCGC
TTCTGCATTAAGGCCAGGTCACTTAGCACTAAGCTGAAGC
CAATCGGAGAGGAGGATGAGGACGTAGCCCGAGAGAGGCA
AAGGATTCTGGGAGGAGGAGGACAGACTGATATCCTGGAG
CTCAGGCAGCTCACCAAGGTGTATAAGAGGAAGCAGAAGC
CAGCTGTAGACAGACTGTGTGTGGGAATCCCACCTGGAGA
GTGTTTTGGGTTGCTGGGTGTGAATGGAGCCGGAAAGACG
AGCACCTTCAAGATGCTAACCGGAGACTCTGTGGTCACCA
GCGGAGAGGCCTACTTAGCAGGAAACAGCGTGCTGACGGA
GATTGATGAAGTGCATCAGAATATGGGCTACTGCCCGCAG
TTTGATGCCATCAATGACCTGCTGACGGGCAGAGAGCATC
TGGAGTTTTATGCCATCCTGCGTGGCGTCCCTGAGAAAGA
AGTGTGCAAGGTCGCAGATTGGGGCATCCGCAAACTGGGC
CTGATGAAGTATGTGGACAAAGCAGCAGGAAGCTACAGCG
GAGGAAACATGAGGAAGCTTTCCACCGCCATGGCGCTCAT
TGGAGGACCGCCGGTGGTGTTCTTGGACGAACCCACCACT
GGGATGGACCCCAAAGCACGGCGGGCCCTGTGGAACTGCA
TCCTCAGCATCATTAAAGAGGGACGCTCCGTCGTGCTGAC
CTCACACAGTATGGAGGAATGTGAAGCTCTTTGCACTCGG
ATGGCCATCATGGTGAACGGCAGGTTCCGCTGTCTGGGCA
GTGTGCAGCATTTAAAGAACAAGTTTGGTGACGGGTACAC
CATCATCCTGCGGGTGGCAGGCGCCGATCCGCGGCTGGAG
CCGGTGATGGAGTTCATCGAGCGGGAGCTGCCGGGCAGTA
CGCTGAAGGAGAAACACCGAAACATGCTGCAGTACCAGCT
GTCCTCATCCCTGACCTCCCTCGCTCGCATCTTCAACATC
CTCTCCAAGAACAAAGAGCAGCTCCACATCGAGGACTACT
CCGTCTCACAGACCACTTTAGACCAAGTTTTTGTCAATTT
TGCCAAGGACCAAAGTGACGAGGACCACTTAAAAGACATT
TCCATGAACAAAAATGATGCCGTTGTGGACATTTCGAAAC
TGAACGCCTTCCTCACAGACGAGAAGGCCAAAGAGACAGT
GGTGTGATCTGGTTACAAAAACCTTCACGGGACTAGTGTG
TCATTTTTTGTACTACTTTTTAGTTTTTTGTTGTATTTCA
GCAGTGTGTTTGTGTGCCCGGAAATGGGCGCTGGACCTAA
AACACACACTACTGAAACAAACCAATGCAAATCAATGCAA
AAAGAGAAGAAGATTGGAGTAAACACTGAGGAAAGTCGAG
CCTGGCGCTCACCACTCCCTCATGGTGAACTCAATGAAAC
TTGAAGCTTTTCGCTCCACAATCGGTGAATGTTCAATCGA
CGAAAGACGTCCGCGGAGTTTCTTTCGAGAATCAACGAAA
CACTGCCAATGAGATCCAGTTCAGGGCCGAAGTTCATCTC
CTCATCTAACGCAGGCTTCAAAACACTTTGCATTTCAGCA
ACTATTCTTCTACGTTATTTTTTTAGATATATGCATTTTG
AAACTATACTCAAGTGATTTTGTTTTCCGATGTGCAATGT
TTCACTATTGTTGTCAAGTGTTTTGAAAGTGTGGTGCCTT
GAAACAACACTCCGCTATTGGACAGCAGCCGTAGAGCGCG
CACTCTCAGTGGGGTCTTTATCTAACGTCTCATGTGACGA
CAGAGCGGACGGCTTTCGGAGTTTATTGCATGCTTTACAT
GGATGCCGTGTTTAGGACGCCATCGTAAGCTCAAGCATGT
TGTAGCTTCATTACACTGAAGTATTTTCGCGTGGGTATCA
ACGGATGGTCGCTGACTTTCGGCGGGAATTGTTTTTTTCG
TGTGCGAAACAGGCAGAAGTTCGTATCGTGAATCTGTTCC
GAAGCAATTCAAGTGTCCGTGCCAAAACCAGGTCAAGTGG
TTCAATATTTTAGCGAAATGATCATATTATAGAGCAGTGT
TGAATATTTTTTGTTGTCTTGAACTAAAACAAGAGTTTCC
TTGTACAGTAAGGCCTGGAGAGACATCCGTAGGCCTCTGA
TACAGATTTAAAGGGACAGTACACTGAAAACAAAAAGATG
ATACTGCCATCGTTTACTTTCTGTCGACGATATTTCGAAG
AATGTCTCTCTTTAACTTCCATAGTAATTGTAGCTGCATA
TAGTTCCATTGTTGGTTCTGACGCATTTATTCCTTGAACA
GTTTGATAATAAAATGAAATGTCCTTACCTTTAAAAAGAA
ATTTGTATATTCCAATCCGTTTATTGTCAATTTAGTCAAA
ATTTAAAAAGTAAACATTAAAATTAAGTATGGGTGACGTA
AAACTGATGTTTCGACACAGTGTTTAATCTCGAAGTGCAA
GTATTCCGAAACACTGCATCGAAGCATGATCCGAAACACC
CAGGTCACGTGAGTAATGTGATCCAAAACACCCAGGTCAC
ATGACTAAGGTGATTCGTAACACCCAGATCACCTAACTAA
TGTGATTTGAAACACACAGGTCACATGACTAAGGTGATTC
GTAACACCTAGATCGCCTAACTAATGTGATTTGAAACACA
CAGGTCATGTGACTAAGGTGATTCGTAACACCCAGGTCAC
TTAACTAAGGTGATTCGTAACACCCAGGTCATGTGAGTAA
TGTGCTTCGAAACACCCAGGTCACATGACTAAGGTTATTC
GTAACACACAGGTCACGTGACTAAGGTGATTCGAAACATC
CAGGTCACATGACTGAGGTTATTCGTAACACCCAGGTCAC
GTGACTAAGGTGATTCGAAACATCCAGGTCACATGACTGA
GGTTATTCGTAACACCCAGGTCAGGTGACTGAGCAATACA
CAAATATGACCACTAGGTGTAACTCTAGAGACGGGTTTCA
AAACGTTTCGAGGCTTCGACACATTTGCTATCATGAAGCC
TCGCTTTGCTCACTACTAATCAATAAAAACATACTCAAGT
CCATCACGGTCAAAAAGTACGTTTGACCTTCTTCCATTCC
CCGCAGGTCATCGCTAGGAGAGCATAACTACATTATACAC
CATCTAGTGGTGTGAAAGAAAATTACAACCAAAAAAATAA
AGGCTCCTACAGTAGTTATGTTTTTCTGCTATGGTAGTCG
ATGGATGTCAGGGAGCAGCATTCTTCAAAATATCTTCTTT
TATTTTCGGCAAAATAAAGAAACCACTCGATGGAGAGTAA
ATGATGAGGCCATTTTCTTTTTTTTGTGCGTGAACTGTCC
TTTTATTAACTCAGGATGTGCCTCTTTATCCTGTGTAAAC
GGTTTGTTTAGGTTTATTTGACCACTTTTACCATCGTGAC
CAGTGCTCTCTACAGCACCGTTGTTGATCGCCTACAGCGA
GAAGTGACCAAACGCAATGAGGTGCTACTGATTGAGTAGA
TTTTCCAAATCTTTGAGGTGCTGTTTGGTCAAACACCTTC
AGAAATTAGACAACAATCCTTAATGCACATTTAACGACGT
GGAAGAAGAAACGAAGAAGAAGAAATAAAACTAGTATTGT
CTTTGGTCCAAATCTGAAGCACTTTATAGCAATGTTAAAC
TGCTCTCGATGGTCATCATTCACAAACGGGATGTTTTCTG
TTTAATGAAAGATTAATAGGCTATTTTAAAATGTCCCGCC
ATGGCCATTATTTTCTGTGTTACGATGTATGTGTTTACAT
TTGAAATATTAAAAAACTATTTCAGTCA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations