Transcript

dkc1-202

ID

ZDB-TSCRIPT-090929-18910

Name

dkc1-202 Nomenclature History

Previous Names

dkc1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

dkc1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000126190 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000126190.4|gene_biotype:protein_coding|ENSDARG00000016484.11 transcript_biotype:nonsense_mediated_decay gene_symbol:dkc1 cdna chromosome:GRCz11:21:43702010:43710210:1
CGCTGCCTGTGTGGAGAAATGCGCATGCTCGGCCATTCAC
ACGTGCTGCAGTTCAGAAGCGCGCAGCTGTGGTGAAGATG
GCGGACACTGAAAGTAAGAAAGAGAAGAAAAGGAAGTCTA
AGAAGATTTCTGATGAAGAAGTTGGGGACATTCAAGAAAG
CGGAGACTTCCTCATTAAACCTGAGTCTAAGGTTGCCAGC
TTGGACACATCTCAATGGCCGTTATTGCTTAAGGTCTGGT
TTCATTAATCTGGACAAACCCGCAAACCCATCCTCCCATG
AAGTCGTGGCCTGGATCAAGAGAATCCTTCGTGTGGAAAA
AACGGGTCACAGTGGCACTCTGGACCCCAAAGTCACGGGC
TGCCTGATCGTGTGTGTGGAGCGAGCCACACGACTGGTCA
AATCCCAGCAGAGCGCAGGCAAAGAGTATGTGGGCATAGT
ACGGCTGCACAATGCACTAGAGAACGAACACCAGCTAGCG
AGGGCTCTGGAGTGTTTAACAGGAGCTCTGTTCCAGCGGC
CGCCGCTCATCGCTGCTGTGAAGCGCCAACTGCGAGTGCG
CACCATCTACGAGAGCAAGCTTATTGAATATGATCCTGAG
AGAAGATTAGGTATTTTCTGGGTGAGCTGCGAAGCGGGCA
CATATATCCGAACTCTGTGTGTGCATCTGGGTCTGCTGCT
GGGGGTCGGCGGGCAGATGCAGGAGCTGCGACGAGTCCGT
TCCGGTGTTTTGGGTGAAAAGGATAACCTGGTGACCATGC
ATGATGTGTTGGACGCCCAGTGGCAGTTTGACCACAACAA
AGACGAGACGTACCTGAGGAGAGTGATCTTCCCTCTGGAG
AAACTCCTCA

OTTDART00000038532 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038532|OTTDARG00000028340|ZDB-GENE-031118-120 dkc1|OTTDARP00000030879 dkc1-002 LG_ CR792441.21 Danio rerio protein_coding KNOWN, 850 bp
CGCTGCCTGTGTGGAGAAATGCGCATGCTCGGCCATTCAC
ACGTGCTGCAGTTCAGAAGCGCGCAGCTGTGGTGAAGATG
GCGGACACTGAAAGTAAGAAAGAGAAGAAAAGGAAGTCTA
AGAAGATTTCTGATGAAGAAGTTGGGGACATTCAAGAAAG
CGGAGACTTCCTCATTAAACCTGAGTCTAAGGTTGCCAGC
TTGGACACATCTCAATGGCCGTTATTGCTTAAGGTCTGGT
TTCATTAATCTGGACAAACCCGCAAACCCATCCTCCCATG
AAGTCGTGGCCTGGATCAAGAGAATCCTTCGTGTGGAAAA
AACGGGTCACAGTGGCACTCTGGACCCCAAAGTCACGGGC
TGCCTGATCGTGTGTGTGGAGCGAGCCACACGACTGGTCA
AATCCCAGCAGAGCGCAGGCAAAGAGTATGTGGGCATAGT
ACGGCTGCACAATGCACTAGAGAACGAACACCAGCTAGCG
AGGGCTCTGGAGTGTTTAACAGGAGCTCTGTTCCAGCGGC
CGCCGCTCATCGCTGCTGTGAAGCGCCAACTGCGAGTGCG
CACCATCTACGAGAGCAAGCTTATTGAATATGATCCTGAG
AGAAGATTAGGTATTTTCTGGGTGAGCTGCGAAGCGGGCA
CATATATCCGAACTCTGTGTGTGCATCTGGGTCTGCTGCT
GGGGGTCGGCGGGCAGATGCAGGAGCTGCGACGAGTCCGT
TCCGGTGTTTTGGGTGAAAAGGATAACCTGGTGACCATGC
ATGATGTGTTGGACGCCCAGTGGCAGTTTGACCACAACAA
AGACGAGACGTACCTGAGGAGAGTGATCTTCCCTCTGGAG
AAACTCCTCA

Related Transcripts

Transcripts related to dkc1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	dkc1-202	Ensembl		850 nt
mRNA	dkc1-201 (1) Ensembl	Ensembl		1,906 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations