Transcript

nop56-202

ID

ZDB-TSCRIPT-090929-18664

Name

nop56-202 Nomenclature History

Previous Names

nop56-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000102433 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000102433.6|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:nonsense_mediated_decay gene_symbol:nop56 cdna chromosome:GRCz11:21:11959298:11970187:-1
GAGTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGC
ACGAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCG
AGCATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGT
GGAGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGT
GTCCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGA
GTGCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGA
AAACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGAT
CTTAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTA
AAAAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGG
AGCAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACT
GGAGATAACGATGGACAGTGCAAAAGCTCAGGCCATCCTC
GATGCGTCCCGCAGCTCCATGGGTATGGATATCTCTCCTA
TTGACCTGATCAATATTGAGTGCTTCTCCAGTCGTGTGGT
GTCCCTCACAGACTACAGACAGGAACTGCAAGAGTACCTG
AGGTCAAAAATGGGCCAGGTGGCACCAAATCTCGCAGCTC
TCATTGGTGAAGTGGTTGGTGCTCGCCTGATCTCTCACGC
TGGCAGTTTGACAAACCTGGCCAAATATCCGGCGTCCACC
GTGCAGATCCTGGGTGCAGAGAAGGCCCTGTTCAGAGCAT
TGAAGACCAGAGGAAACACGCCTAAGTACGGTCTCATTTT
CCACTCGACATTCATCGGGCGCGCAGCTGCCAAAAATAAG
GGTCGTATCTCGCGTTACTTGGCCAACAAGTGTACCATCG
CATCCCGCATTGACTGCTTTTCTGAGGTTCCCACAAGTGT
GTTTGGTGATAAGCTTCGTGACCAGGTAGAAGAACGTCTG
GCCTTCTATGAGACAGGGGAGGCTCCACGAAAGAATCTGG
ATGTCATGAAAGAAGCTGTTGCACAGGCTTCTGAGGTGGC
TGCTGAAATAAAGCGGAAGCTTGAGAAAAAGGAAAAGAAG
AAAAAGAAGCGGCAGAAGAAGCTAGAAGCTCTTTCCACTG
CAGAAGGAGATGAGGAAACCAATGGTGATGTTGAGGAAAA
TGAAGTCGCCACAA

OTTDART00000038274 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038274|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|OTTDARP00000030672 nol5a-002 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 1134 bp
GAGTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGC
ACGAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCG
AGCATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGT
GGAGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGT
GTCCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGA
GTGCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGA
AAACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGAT
CTTAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTA
AAAAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGG
AGCAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACT
GGAGATAACGATGGACAGTGCAAAAGCTCAGGCCATCCTC
GATGCGTCCCGCAGCTCCATGGGTATGGATATCTCTCCTA
TTGACCTGATCAATATTGAGTGCTTCTCCAGTCGTGTGGT
GTCCCTCACAGACTACAGACAGGAACTGCAAGAGTACCTG
AGGTCAAAAATGGGCCAGGTGGCACCAAATCTCGCAGCTC
TCATTGGTGAAGTGGTTGGTGCTCGCCTGATCTCTCACGC
TGGCAGTTTGACAAACCTGGCCAAATATCCGGCGTCCACC
GTGCAGATCCTGGGTGCAGAGAAGGCCCTGTTCAGAGCAT
TGAAGACCAGAGGAAACACGCCTAAGTACGGTCTCATTTT
CCACTCGACATTCATCGGGCGCGCAGCTGCCAAAAATAAG
GGTCGTATCTCGCGTTACTTGGCCAACAAGTGTACCATCG
CATCCCGCATTGACTGCTTTTCTGAGGTTCCCACAAGTGT
GTTTGGTGATAAGCTTCGTGACCAGGTAGAAGAACGTCTG
GCCTTCTATGAGACAGGGGAGGCTCCACGAAAGAATCTGG
ATGTCATGAAAGAAGCTGTTGCACAGGCTTCTGAGGTGGC
TGCTGAAATAAAGCGGAAGCTTGAGAAAAAGGAAAAGAAG
AAAAAGAAGCGGCAGAAGAAGCTAGAAGCTCTTTCCACTG
CAGAAGGAGATGAGGAAACCAATGGTGATGTTGAGGAAAA
TGAAGTCGCCACAA

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201 (1) Ensembl	Ensembl	836 nt	Select Tool
aberrant processed transcript	nop56-202	Ensembl	1,134 nt
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool
ncRNA	nop56-003 (1) Ensembl	Ensembl	826 nt	Select Tool
ncRNA	nop56-004 (1) Ensembl	Ensembl	794 nt	Select Tool
ncRNA	nop56-005 (1) Ensembl	Ensembl	799 nt	Select Tool
ncRNA	nop56-007 (1) Ensembl	Ensembl	1,014 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations