ZFIN Transcript: col5a2a-201

Sequence
OTTDART00000034499 (1) [ Show ] (double-click sequence to select)
>tpe|OTTDART00000034499|OTTDARG00000026069|ZDB-GENE-081104-515 si:ch211-198b21.5|OTTDARP00000027808 CH211-198B21.5-001 LG_ BX640465.7 Danio rerio protein_coding NOVEL, 5063 bp
TCTGTCTTCATGGTGCAGCGATAACCTGGACTCTTTTTGT
CCTTCCTCTTCCCCATTATTTGCACACAAGAACAGCTCAT
GTCTTTGATATGGGCATGATGATCTTTGAGCCTTATAGGA
CTGTCCTGTTTCTGGCTTTATCTGTGACTCTTTTACAATC
CGTGAGATGCCAAGACGGTGAGGATGAGTTGAGCTGTACA
GAGAACGGGCAGGTGTACACAAACAGAGACATCTGGAAAC
CTGAGCCATGCAGGATCTGTGTTTGTGACAGTGGAACCAT
CCTGTGCGATGAGGTACAATGTGATGAGGTGTCGAACTGT
GCAAAGGTAGTGATCCCACCGGGAGAGTGCTGTCCGGTCT
GCCAGGGCGATGCAGCTGAAGGTGGCAATGGCAGACCAGG
AGGCAGAATCGCCAAGGGCCAGAAAGGGGAACCTGGAGTT
GTACCACATATCGTTGGAATAAGAGGTCGTCCTGGACCAA
TGGGGCCTCCAGGAGCACCAGGGTTTAGAGGAGACAGCGG
ACCCAAAGGTCGACCTGGTCTTAGAGGTCCCCCTGGTTAT
GATGGAGAGCCTGGTATTCCAGGACACCCAGGAGAGCCAG
GACCTCCAGGACCTCCTCCCGGAGGTGAGTTGGCTTCACA
TATGGCTGGAGGATTTGCTGACAAAATGGGACCCCAGGCA
CTAATGCCCGGTGTTCGGGGAGAAGCAGGAACAAGGGGAC
CACCTGGGCCGAATGGGTCACCAGGACCTTCTGGACCACA
AGGACCTCCTGGTGATGTAGGAGATCCAGGGCCAATGGGT
GGCGCTGGGCAGAGGGGACCAGAGGGTCCTCCGGGAAAGC
CTGGTGAAGATGGAGAAGCAGGTACTCCAGGAAGTGCAGG
AGAAATGGGATTCCCTGGATCTCCGGGAGGAAGAGGATTT
CCAGGGACACCGGGGCCCCCAGGCTTAAAGGGCCACAGAG
GTCACCAAGGTCCAGATGGTCTTAAAGGAGAACGTGGAGC
TTTGGGATCCAAGGGTGAATCTGGTGGATCTGGTCCAATG
GGTGCTCCTGGTCCTATGGGTCCCAGGGGAATGCCAGGAG
AAAGAGGACGCCCAGGTCCAGGTGGCGCAGCGGGTACACG
TGGTGGTCAAGGAAACATGGGAAAACCAGGCCCGATGGGT
CCTATGGGAATTAATGGTGCCCCAGGTTATCCTGGATCTC
CAGGCATGAAGGGTCAACCAGGACCTACTGGTGTGAGGGG
ACCAGAGGGACCACAGGGACAAAGAGGAGAAACAGGACAT
CAAGGCAGATCTGGACCAACAGGACAACAAGGCCCTATGG
GCACTGATGGTGGTCCAGGTTCCAAAGGCCCAGTGGGAGT
TCCTGGTCCTCAGGGTCCCGTTGGTCTACTTGGGCCAACT
GGCCCACCAGGTCCTCAGGGAAGCACTGGACAGCCTGGGA
TCAAAGGTCAATTGGGAGATTTAGGTGTTGCTGGATTTAA
AGGAGAGGCTGGACCTAAAGGAGAACCTGGTCCACCAGGA
TCACAGGGAGTACTTGGACCTCAGGGAGAGGAGGGAAAAC
GTGGACCCAGAGGAGATCCTGGTTCTATTGGCCCACCTGG
ACCTGTTGGTGAGAGAGGGGCACCTGGAAACAGAGGCTTT
CCAGGTCAAGATGGCTTACAGGGTCCAAAGGGTGCACAAG
GAGACCGTGGAACTTCAGGAACCTCTGGCCCTAAAGGTTC
AACTGGTGATCCAGGAAGAACAGGTGAACCAGGTCTACCA
GGAGCAAGAGGTTTGACAGGTACGCCTGGAGTTCAGGGTG
CTGAAGGAAAACCAGGACCATTGGGTGCTCCAGGTGAGGA
TGGACGTCCAGGGCCTGCAGGGTCGACAGGAACAAGAGGC
CCTATCGGAACTATGGGACCAATAGGACCCAAGGGTTTTA
GTGGGGATCCAGGAAAGGCAGGTGAGCAGGGATCTGCTGG
AGTTCCTGGGCAAAGGGGTCCACCTGGCAAAGATGGAGAA
GTAGGCCCAGCTGGTCCACCAGGTCCACATGGTACAGCAG
GCGAGCGAGGTGAACAGGGACCTCCTGGAATGCACGGTTT
CCAGGGGTTGCCTGGACCAGCAGGTGCTCCTGGGGAGGGA
GGAAAACCTGGTGATCAGGGTATCCCTGGTGAGGGTGGTC
CAGTTGGCCAAATTGGACCAAGGGGTGAACGTGGAATCCC
TGGAGAGAGAGGAGAGTTGGGACCTGCTGGTCTGCCTGGA
GCCAAAGGTATCCCAGGAGCACCTGGTCCTGATGGCCCAA
AGGGCAGCCCTGGACCTACTGGTACATTGGGCAATCAAGG
CCCTCCTGGTCTGCAGGGAATGCCAGGTGAAAGAGGGATC
TCTGGCCCACCTGGTCCAAAAGGAGACAGAGGAGCTATTG
GTGAGAAAGGATCAGAAGGCACCCCGGGAAGTGATGGTGC
AAGGGGTTTGACTGGTCCAATTGGCCCTGCAGGACCCCAT
GGCCCAAGTGGTGAAAAGGGAGAACCAGGCCCTAAGGGAC
CACCTGGTCCTCAAGGATCAAGAGCAATGCCAGGTTCCCG
TGGTGAACCTGGGCCAATAGGTGCTGTGGGCTTTGTCGGA
CCTCCTGGTCTTGATGGTCAGCCTGGTCCAAAAGGACCAC
CTGGAGAGCCTGGACAAAAGGGTGATGCTGGATCTCCTGG
CCCTCAAGGGTTGGCTGGCCCTCCTGGGCCACAGGGTAAA
CTTGGTGTTGCTGGACCAAAGGGTGGTAGAGGAACACAGG
GGGCACCAGGTCCAACCGGGTTTCCTGGATCTGCTGGAAG
GGTTGGCCCACCTGGTCCAACAGGTCCTATTGGTGAACCA
GGTCCTCTTGGTCTTCCTGGAAAAGAGGGTCCACCTGGAC
TTCGAGGAGACCATGGACCTCCAGGACGCCAAGGAGAAAG
AGGCCCCCCTGGGCCTGCTGGAGGCCCTGGGGACAAAGGA
GATTCTGGAGAAGATGGACCACCAGGACCTGACGGTCCAC
CCGGTCCTGCAGGAACAACAGGGCAAAGAGGAATTGTAGG
CCTTCCTGGTCAAAGAGGAGAGCGTGGAATGGCAGGACTC
CCTGGACCTGCAGGTCCTCCAGGAAAACAGGGTACATCAG
GAGCCCCTGGAGACAAAGGACCACCTGGCCCTGTTGGAGT
GCCGGGTGCTAATGGACCTCGGGGAGATCCTGGACCTGAT
GGACCCGCTGGATCTGATGGCCCACCAGGAAAAGAAGGTG
TCATAGGAGCCCAGGGTGATCGAGGAGATCCAGGCCCAGA
GGGTGTGCTTGGAACTGTAGGACAGCCTGGGCCCCCTGGT
CCTGTTGGTGCAACTGGGGGGGTTGGAAAGAGAGGAGAGC
CTGGTTCAAAAGGACCCTCTGGCCCTCCAGGTCCAGCTGG
AAAACGAGGACTCACAGGACCACAAGGACCAAGGGGAGAT
AAGGGTGATATTGGTGACCATGGGGAAAGAGGACAGAAGG
GTCATAGAGGATTTGCAGGCTTACAAGGTCTTCCTGGATC
ACCTGGCACAACTGGAGAACAAGGGGCCACAGGCATTGTT
GGTCCAAGTGGACAAAGAGGACCTCCTGGACCTATTGGGC
CACCAGGAAAGGAAGGCTACATTGGGCAACCTGGACCAAT
GGGACCTCCTGGTTCAAGAGGATCTAGTGGGGATATTGGA
CCAGAGGGACCACCTGGTGAGCCAGGCCCACCTGGCCCTC
CTGGCCCTGCTGGACCACCCACTGCAGCTGTGGATGATCT
TTTTGGTGGAGCACATGATTTTGACAGTGGTCCTTCTCCC
CCTGACAATAATCAGGATGAGGCTCTTCCCATGAGCAACT
CTACAAGTGTGTTCCAGGCTGATCCTGGAGTTCAGGCTAC
TTTAAAGGCTCTGAGCAGCCAGATTGATAACATGCGTAGC
CCTGATGGTAGCAGAAAACATCCTGCCAGAACTTGCGAGG
ACTTGAAACAGTGCTACCCTCAAAAAAAGAGTGGTGAATA
CTGGGTAGATCCAAACCAAGGCAGTGCAGAGGACGCCATT
AAAATCTATTGCAACATGGACACCGGAGAAACATGCATCT
CCGCAATTCCATCCAGCATCCCCCGGAAGTCATGGTGGAG
CTCCCCAGGAAATAAACCTGTGTGGTTTGGAGCTAATATG
AATGGAGGAACATATTTCACTTATGGGAACAAAGACCAGC
CAGCCAACACTGTCACAGTTCAGATGACTTTCATCCGTCT
ACTCTCAAAAGAGGCATCACAGACTATCACTTACCACTGC
AAGAACACTGTGGGCTACAAGGATGAATCAACTGGAAACC
TCAAGAAAGCAGTCATCCTCAAAGCTTCAAATGATCTAGA
GCTCAAAGCTGAGGGAAATAACCGCTTTAGATACACCGTC
CTTGAGGACAGTTGTTCACAAGCAAATGGGAATTGGGGCA
AGACAGTGTTTGAATACAGGACCCAGAAAACAGCAAGACT
ACCTATTGTGGATATTGCACCAGTGGACATTGGAGGTTCA
GATCAGGAGTTTGGAATTGATATTGGGCCTGTGTGCTTCT
TGTAAATCACGAAGTGGAGACGCATTGAAGAGATTCCTGG
GACTCTCGTGAGTGACTGCTGAAAAGATCAGCCTTGTACA
TACAGAGCATTGGACTTTTCTGGCCCCTGTAGCAAGATAT
TTATTGTGCCTGCCAAGTGATTCCTGAAATCAACCACTCA
ACAAGGTTTTTTCCAGATTGAGCCCTTGAAATAAATTCAA
TTAACTGAATTTTACTCTACAAGACTATCCATCAACTGCT
GTTTTAAATTGAGATGGCAATTGCTAACAACACCGTAATG
ATCGTACACACTGTACCAACGCTAGTTGCAATTAAAATCA
TCTGAATTTGCCTTTTTTTCATGACAATATTTTTGTTTTT
GTATTATTGTTACACAAAAATGGTGCTATAGAGGAAGTTT
ACGTTAAAATGAATATTTTTGACTCCCAAATCTGTACTCT
TGTTCGATCACCTTGTAGTTAATTACAACATGAGTTTACA
ATTAAAGATGAAATTTTACAGAA
Related Transcripts
Transcripts related to col5a2a
Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	col5a2a-001 (1)	Havana	4,276 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	col5a2a-201	Ensembl	5,063 nt
ncRNA	col5a2a-002 (1)	Havana	984 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations