Transcript

ottdart00000009539

ID
ZDB-TSCRIPT-090929-1523
Name
ottdart00000009539 Nomenclature History
Previous Names
  • itsn1-002
Transcript Type
ncRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000139573 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000139573.2|gene_biotype:protein_coding|ENSDARG00000000086.12 transcript_biotype:processed_transcript gene_symbol:itsn1 cdna chromosome:GRCz11:1:47019011:47071948:-1
ATGGCTCAGTTTCCCACACCCTTCGGAGGGGGGTCGGATA
CATGGGTAATATCTGTGGACGAGAGAGCCAAACATGACCA
GCAGTTTCACAGTCTCACCCCAACACCCGCTGGCTTCATC
ACAGGTGACCAGGCAAGGAATTTCTTCCTGCAGTCAGGTT
TACCTGCCCCCATCTTGGCCCAGATATGGGCTCTGGCCGA
CATGAACAATGACGGGAAGATGGACATGCATGAGTTTTCC
ATCGCAATGAAGCTGATTAAATTAAAGCTGCAGGGTCACC
CTCTTCCTCCATCACTGCCCCCCTCCATGAAGCAACAGCC
CATCTCCATACCCCCGCCGACCCCTTTTGGAGTGCCAGGG
ATGGGTGTTTCTCCTCCACTGGGCGCATCGGTAACCCCAC
CCGTACCATCCCTCGCCAACGGAGCACCCGCAATGATACA
ACCCCTGAGTGGATTTTCACATCCAGGTGCCGTGCTCAAC
AAAACCCCCTCATTCAATCGCTCCAGTATCAAGCTACAGA
AGGGCCAGTCTGTAGAGGCGCCCAGTGCTCCAGCTGCTCC
TCCACCCGCTGACTGGGCCGTGTCTCAGTCCTCCAGACTT
AAGTATCGCCAGCTCTTCAACAGCCATGATAAAATGATGA
GCGGTTATCTCACAGGTCCACAAGCCAGAACTATTCTGAT
GCAGTCCAGTCTACCACAAGCCCAGCTGGCCACCATCTGG
AATCTGTCAGATATAGATCAGGATGGGAAGTTGACCGCTG
AAGAGTTTATTTTGGCCATGCACTTGATCGACATGGCCAT
GTCTGGTCTCCCTCTTCCCCCTTTGCTGCCGCCTGACCTT
ATACCTCCAACATTCAGGAGAATGCGCTCTGGTAGTGGAG
TGTCTGTGACTAGCATGCACTCGACAGACTTGCGGTCTCA
GGAAGAGCCAGAGGAGGAGGAGAAAGAGGCCGAGAAAAAA
CTTCCAGTCACATTTGAGGATAAGAAACGAGAGAACTTTG
AGCGCGGAAACCTGGAGTTGGAGAAACGTCGACAGGCACT
TCTGGAGCAGCAGAGGAAAGAGCAGGAGCGACTGGCGGCG
CTGGAGAAAGAAGAGCAGGAGCGGAAGGAGAGGGAACGAC
TGGAGCAGGAGAGACGCAGACAGCAGGAGCTGGACAAACA
GCTGGAGAGACAGAGGGAGCTGGAGCGACAGCGGGAGGAG
GAGAGACGCAAGGAGATCGAGAGAAGAGAGGCTGCTAAAC
GGGAGCTGGAGCGACAGAGGCAGCTGGAGTGGGAGAGGAC
GCGCAGACAGGAGCTGCTCACCCAAAGGAACAGAGAACAG
GAGAACATCGTCCTGCTCAAAGCACGGAAGAAAACTCTCG
AGTTTGAGCTGGAGGCTCTGAATGATAAGAAGTCTCAGTT
GGAGGGGAAACTGCAGGATATTCGGTCCCGTCTCTCGATT
CAGAGGCATGAGATCGAGACCACCAATAAGACTCGGGAGC
TCCGCATTGCAGAGATCACAAGCCTGCAACAGCAGCTGCA
GGAGTCTCAGCAGTGGTTGAGTCGCTTGATTCCTGATAAA
CAGTGTCTGAATGACCAGCTGAAGCAGGTTCAGCAGAACA
GTCTGCACAGAGACTCTTTGAACAGTCTTCAGAGGGCCAT
TGAAATGAAAGAATCCACCAAACAGCAGCTGAAAGAACAG
CTGGATGCTGTGGAGAAGGAAACTCGCTCCAAACTATTGG
AGATCGACGCCTTCAACACACAGCTGAAGGAGCTGAGAGA
AATCCACAACAAACAGCAGAGGCAGAAACAGAAGGAGCTG
GAGGCTGACATCACCCAGCCGTCACATGACAGGAAGTCCA
TAGACTCACAAGACTCGAGGTTGTCGGGGACTGATGATGG
CGTGTCTCCAGCGTGGAGGGATGATGGGCTGGGTAAAGCT
CCTACTCCTCCTGTGTCTCAGGCCTGGATGAGCCGGGTGA
GTGAAGAAGAAAACCACAGCCGAGCTGAAATACAGGATAA
CCTCTCCAAGCTTTTCACCCAACATCCACAAGCAGGAAAA
ATACAGGCTCAGTCTCCCTGGTCCATGGCAGATAAGATCC
CAGTGTCTGGTTTTAATCAGGAGAAGGTAAAGGTGGTCTA
CTATAGAGCAATGTATCCCTTTGAGGCCCGCAGTCATGAT
GAGATCACCATCCATCCTGGAGACATAGTCATGGTGGATG
AGTCTCAGACAGGTGAGCCTGGATGGTTAGGAGGAGAGAT
TAAAGGGAAGACTGGCTGGTTTCCTGCCAACTATGCGGAG
AAGATTCCAGAATCCGAAGTTCCTCTGAGTTTGAGGGCCA
GCGCTGCTTCTAGCTCCGCCCCTAAATTGGGTTCTCACAT
GTCATCTGCTTCTTCATCGACCACGGCCACGCCCATTCTG
CCAGTCTCCACAGAGCCTGCATCGATAGCCCCGCCCTCTT
CAGCCCCACCCCCCACAGGCCCCGCCTCCTCCTCTTCCTC
AGCATCAAGCAATTGGGCAGATTTCAGCACTACATGGCCC
TCTAATTCTGCTGTGGAGAAGCAGGATAGTGATGGATGGG
ATGCATGGCCGACTCAGCCAACTCAGCCTTCTCTGTCAGT
GCCCAGTGGAGGGCAGATCAGACAGCGCTCTGCTTTCACG
CCTGCTACACTCTCCGGCTCCTCCCCCTCACCCGTGCTTG
GACAGGGTGAGAAGGTGGAGGGTCTGCAGGCTCAGGCGCT
GTACCCATGGAGAGCCAAGAAAGACAATCATCTAAACTTC
AACAAGAATGACGTGATCACTGTACTGGAGCAGCAGGACA
TGTGGTGGTTTGGGGAGGTGCAAGGACAGAGAGGATGGTT
CCCTAAATCTTACGTCAAGCTCATCTCTGGACCTGTCCGG
AAATCTATGAGTATTGAGTCTGGCTCTTCAGACAGCCCTC
CTAGTGTAAAGAGACCCAGTCCCTCTCTAAACAAACCCAC
AGAGCTCGGAGAAGGTCAGAACTCCAACAGCAACTCAATG
TATCCGTCTAAAGAGTATGTGGCCATGTATACATATGAAA
GCAATGAGCAGGGTGACTTGACCTTCCAGCAAGGTGATGT
CATCACAGTCACCAAGAAAGAAGGAGATTGGTGGACCGGC
ACTGTGAGCGGGAAGATCGGAGTCTTTCCATCGAATTATG
TCAAACCTAAAGAATCTGAGGGGTTGGGATCTGCTGGGAA
AACAGGAAGTTTAGGGAAGAAACCAGAGATTGCCCAAGTC
ATCGCTCCATACACGGCCACTGGTGCAGAGCAGCTCACTT
TAGCACCAGGCCAGCTCATTCTCATTCGCAAGAAAAACCC
GGGAGGATGGTGGGAAGGAGAACTTCAGGCAAGAGGAAAG
AAGCGGCAGATTGGCTGGTTTCCTGCAAATTATGTCAAAT
TATTGAGTCCCAGTACCAGTAAGACAACACCCACAGATCC
CAACCCACCCAAGCTGCCGACACCCAATGCAGTGTGCCAG
GTGATTGGCATGTATGATTACACTGCTCAGAATGATGACG
AGCTGCCTTTCGGGAAGGGCCAAATCATCAATGTGTTGAG
CAGAGAGGATCCCGATTGGTGGAAAGGAGAGTTGAATGGA
TCCGTCGGCCTCTTCCCCTCGAACTACGTCAAGCTGACCA
CCGACACAGACCCCAGCCAACAATGACTCTTATGTTGCCC
ATATCCCACTCAGCCTTGAAAGTCCTCAAAGCGACCCACT
ATCCCTTAAACTGTGCCCAGCGGGATGATGGGAGACGGAA
CATTGATCATGTGACTGCCCCCCCACACACACAGCTGGCT
TTGTGGCCAGAAGAGACGAATACTACAGAGAGCAGTCGTT
AACCTCAATATTCTAGACGCTCACCAAAAAACAAAATGCC
AGCCAGCATCCTCCGCATTATTTAAATAAACATTTTTTTG
AAG

OTTDART00000009539 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000009539|OTTDARG00000008343|ZDB-GENE-030616-226 itsn1|no_translation itsn1-002 LG_none BX470235.7,BX005416.7 Danio rerio protein_coding KNOWN, 3923 bp
ATGGCTCAGTTTCCCACACCCTTCGGAGGGGGGTCGGATA
CATGGGTAATATCTGTGGACGAGAGAGCCAAACATGACCA
GCAGTTTCACAGTCTCACCCCAACACCCGCTGGCTTCATC
ACAGGTGACCAGGCAAGGAATTTCTTCCTGCAGTCAGGTT
TACCTGCCCCCATCTTGGCCCAGATATGGGCTCTGGCCGA
CATGAACAATGACGGGAAGATGGACATGCATGAGTTTTCC
ATCGCAATGAAGCTGATTAAATTAAAGCTGCAGGGTCACC
CTCTTCCTCCATCACTGCCCCCCTCCATGAAGCAACAGCC
CATCTCCATACCCCCGCCGACCCCTTTTGGAGTGCCAGGG
ATGGGTGTTTCTCCTCCACTGGGCGCATCGGTAACCCCAC
CCGTACCATCCCTCGCCAACGGAGCACCCGCAATGATACA
ACCCCTGAGTGGATTTTCACATCCAGGTGCCGTGCTCAAC
AAAACCCCCTCATTCAATCGCTCCAGTATCAAGCTACAGA
AGGGCCAGTCTGTAGAGGCGCCCAGTGCTCCAGCTGCTCC
TCCACCCGCTGACTGGGCCGTGTCTCAGTCCTCCAGACTT
AAGTATCGCCAGCTCTTCAACAGCCATGATAAAATGATGA
GCGGTTATCTCACAGGTCCACAAGCCAGAACTATTCTGAT
GCAGTCCAGTCTACCACAAGCCCAGCTGGCCACCATCTGG
AATCTGTCAGATATAGATCAGGATGGGAAGTTGACCGCTG
AAGAGTTTATTTTGGCCATGCACTTGATCGACATGGCCAT
GTCTGGTCTCCCTCTTCCCCCTTTGCTGCCGCCTGACCTT
ATACCTCCAACATTCAGGAGAATGCGCTCTGGTAGTGGAG
TGTCTGTGACTAGCATGCACTCGACAGACTTGCGGTCTCA
GGAAGAGCCAGAGGAGGAGGAGAAAGAGGCCGAGAAAAAA
CTTCCAGTCACATTTGAGGATAAGAAACGAGAGAACTTTG
AGCGCGGAAACCTGGAGTTGGAGAAACGTCGACAGGCACT
TCTGGAGCAGCAGAGGAAAGAGCAGGAGCGACTGGCGGCG
CTGGAGAAAGAAGAGCAGGAGCGGAAGGAGAGGGAACGAC
TGGAGCAGGAGAGACGCAGACAGCAGGAGCTGGACAAACA
GCTGGAGAGACAGAGGGAGCTGGAGCGACAGCGGGAGGAG
GAGAGACGCAAGGAGATCGAGAGAAGAGAGGCTGCTAAAC
GGGAGCTGGAGCGACAGAGGCAGCTGGAGTGGGAGAGGAC
GCGCAGACAGGAGCTGCTCACCCAAAGGAACAGAGAACAG
GAGAACATCGTCCTGCTCAAAGCACGGAAGAAAACTCTCG
AGTTTGAGCTGGAGGCTCTGAATGATAAGAAGTCTCAGTT
GGAGGGGAAACTGCAGGATATTCGGTCCCGTCTCTCGATT
CAGAGGCATGAGATCGAGACCACCAATAAGACTCGGGAGC
TCCGCATTGCAGAGATCACAAGCCTGCAACAGCAGCTGCA
GGAGTCTCAGCAGTGGTTGAGTCGCTTGATTCCTGATAAA
CAGTGTCTGAATGACCAGCTGAAGCAGGTTCAGCAGAACA
GTCTGCACAGAGACTCTTTGAACAGTCTTCAGAGGGCCAT
TGAAATGAAAGAATCCACCAAACAGCAGCTGAAAGAACAG
CTGGATGCTGTGGAGAAGGAAACTCGCTCCAAACTATTGG
AGATCGACGCCTTCAACACACAGCTGAAGGAGCTGAGAGA
AATCCACAACAAACAGCAGAGGCAGAAACAGAAGGAGCTG
GAGGCTGACATCACCCAGCCGTCACATGACAGGAAGTCCA
TAGACTCACAAGACTCGAGGTTGTCGGGGACTGATGATGG
CGTGTCTCCAGCGTGGAGGGATGATGGGCTGGGTAAAGCT
CCTACTCCTCCTGTGTCTCAGGCCTGGATGAGCCGGGTGA
GTGAAGAAGAAAACCACAGCCGAGCTGAAATACAGGATAA
CCTCTCCAAGCTTTTCACCCAACATCCACAAGCAGGAAAA
ATACAGGCTCAGTCTCCCTGGTCCATGGCAGATAAGATCC
CAGTGTCTGGTTTTAATCAGGAGAAGGTAAAGGTGGTCTA
CTATAGAGCAATGTATCCCTTTGAGGCCCGCAGTCATGAT
GAGATCACCATCCATCCTGGAGACATAGTCATGGTGGATG
AGTCTCAGACAGGTGAGCCTGGATGGTTAGGAGGAGAGAT
TAAAGGGAAGACTGGCTGGTTTCCTGCCAACTATGCGGAG
AAGATTCCAGAATCCGAAGTTCCTCTGAGTTTGAGGGCCA
GCGCTGCTTCTAGCTCCGCCCCTAAATTGGGTTCTCACAT
GTCATCTGCTTCTTCATCGACCACGGCCACGCCCATTCTG
CCAGTCTCCACAGAGCCTGCATCGATAGCCCCGCCCTCTT
CAGCCCCACCCCCCACAGGCCCCGCCTCCTCCTCTTCCTC
AGCATCAAGCAATTGGGCAGATTTCAGCACTACATGGCCC
TCTAATTCTGCTGTGGAGAAGCAGGATAGTGATGGATGGG
ATGCATGGCCGACTCAGCCAACTCAGCCTTCTCTGTCAGT
GCCCAGTGGAGGGCAGATCAGACAGCGCTCTGCTTTCACG
CCTGCTACACTCTCCGGCTCCTCCCCCTCACCCGTGCTTG
GACAGGGTGAGAAGGTGGAGGGTCTGCAGGCTCAGGCGCT
GTACCCATGGAGAGCCAAGAAAGACAATCATCTAAACTTC
AACAAGAATGACGTGATCACTGTACTGGAGCAGCAGGACA
TGTGGTGGTTTGGGGAGGTGCAAGGACAGAGAGGATGGTT
CCCTAAATCTTACGTCAAGCTCATCTCTGGACCTGTCCGG
AAATCTATGAGTATTGAGTCTGGCTCTTCAGACAGCCCTC
CTAGTGTAAAGAGACCCAGTCCCTCTCTAAACAAACCCAC
AGAGCTCGGAGAAGGTCAGAACTCCAACAGCAACTCAATG
TATCCGTCTAAAGAGTATGTGGCCATGTATACATATGAAA
GCAATGAGCAGGGTGACTTGACCTTCCAGCAAGGTGATGT
CATCACAGTCACCAAGAAAGAAGGAGATTGGTGGACCGGC
ACTGTGAGCGGGAAGATCGGAGTCTTTCCATCGAATTATG
TCAAACCTAAAGAATCTGAGGGGTTGGGATCTGCTGGGAA
AACAGGAAGTTTAGGGAAGAAACCAGAGATTGCCCAAGTC
ATCGCTCCATACACGGCCACTGGTGCAGAGCAGCTCACTT
TAGCACCAGGCCAGCTCATTCTCATTCGCAAGAAAAACCC
GGGAGGATGGTGGGAAGGAGAACTTCAGGCAAGAGGAAAG
AAGCGGCAGATTGGCTGGTTTCCTGCAAATTATGTCAAAT
TATTGAGTCCCAGTACCAGTAAGACAACACCCACAGATCC
CAACCCACCCAAGCTGCCGACACCCAATGCAGTGTGCCAG
GTGATTGGCATGTATGATTACACTGCTCAGAATGATGACG
AGCTGCCTTTCGGGAAGGGCCAAATCATCAATGTGTTGAG
CAGAGAGGATCCCGATTGGTGGAAAGGAGAGTTGAATGGA
TCCGTCGGCCTCTTCCCCTCGAACTACGTCAAGCTGACCA
CCGACACAGACCCCAGCCAACAATGACTCTTATGTTGCCC
ATATCCCACTCAGCCTTGAAAGTCCTCAAAGCGACCCACT
ATCCCTTAAACTGTGCCCAGCGGGATGATGGGAGACGGAA
CATTGATCATGTGACTGCCCCCCCACACACACAGCTGGCT
TTGTGGCCAGAAGAGACGAATACTACAGAGAGCAGTCGTT
AACCTCAATATTCTAGACGCTCACCAAAAAACAAAATGCC
AGCCAGCATCCTCCGCATTATTTAAATAAACATTTTTTTG
AAG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations