Transcript

clcn2a-002

ID

ZDB-TSCRIPT-090929-13372

Name

clcn2a-002 Nomenclature History

Previous Names

si:ch211-117k11.1-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

clcn2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000135579 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000135579.2|gene_biotype:protein_coding|ENSDARG00000062427.8 transcript_biotype:retained_intron gene_symbol:clcn2a cdna chromosome:GRCz11:2:16933799:16941133:-1
TCTGTACATCACGCTGTAAGAAGTTCCTGATCTCCCGTGT
GGGTGAAGACTGGATCTTCCTTATCCTCCTGGGGCTTCTC
ATGGCACTGGTCAGCTGGGCTATGGACTACACTATTGCCT
TCTGCCAGCAAGCACAGAAGTGGATGTACCGCGGTCTGCA
CAGTAACATGTTGCTGCAGTATCTGGCCTGGGTCACGTAC
CCAGTGGTCCTCATCACCTTCTCCGCCGGCTTCACACAGA
TCTTGGCGCCACAGGCAGTGGGCTCTGGGATCCCAGAGAT
GAAGACCATCCTCCGAGGTGTGGTGCTGAAAGAGTACCTC
ACTTTCAAAACCTTCGTCGCCAAAGTGATTGGCTTAACTT
GTGCCCTTGGAAGTGGCATGCCTCTGGGCAAAGAGGTGCA
TGAGATGGGGATATCTGATCCCAGATAAGCTCGCTAATGC
TGCAATACTTTAAGCCCTTGGCCTGTGATCACATCTGTTA
TTTCAATCTCCTCTTGCGTCCTCTAGGGACCGTTTGTTCA
CGTTGCCAGTCTGTGTGCTGCTCTGTTGAGCAAATTCATG
GCCTTGTTTGGAGGAATCTACATGGTGAGAAACGCCTCTA
GTAAAGCTGTCATTTTTCAGTAACTTTCTGACATTTCATA
CATTGGCAACACTTTATTATAACTTCTATTAAGAACATTA
GCATTGCCAAATATTGTTGTTGTGTTTCATAAAAACGCCG
TTATATTAAACAATTAGATATTGCTTTGTTAAGCACTCCA
AAAAATGATGTTTGCTGTTTGTTCAAACTATTTATATAAA

OTTDART00000031732 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000031732|OTTDARG00000024260|ZDB-GENE-070705-19 clcn2a|no_translation CH211-117K11.1-002 LG_none FP236459.4,BX640595.14 Danio rerio protein_coding NOVEL, 800 bp
TCTGTACATCACGCTGTAAGAAGTTCCTGATCTCCCGTGT
GGGTGAAGACTGGATCTTCCTTATCCTCCTGGGGCTTCTC
ATGGCACTGGTCAGCTGGGCTATGGACTACACTATTGCCT
TCTGCCAGCAAGCACAGAAGTGGATGTACCGCGGTCTGCA
CAGTAACATGTTGCTGCAGTATCTGGCCTGGGTCACGTAC
CCAGTGGTCCTCATCACCTTCTCCGCCGGCTTCACACAGA
TCTTGGCGCCACAGGCAGTGGGCTCTGGGATCCCAGAGAT
GAAGACCATCCTCCGAGGTGTGGTGCTGAAAGAGTACCTC
ACTTTCAAAACCTTCGTCGCCAAAGTGATTGGCTTAACTT
GTGCCCTTGGAAGTGGCATGCCTCTGGGCAAAGAGGTGCA
TGAGATGGGGATATCTGATCCCAGATAAGCTCGCTAATGC
TGCAATACTTTAAGCCCTTGGCCTGTGATCACATCTGTTA
TTTCAATCTCCTCTTGCGTCCTCTAGGGACCGTTTGTTCA
CGTTGCCAGTCTGTGTGCTGCTCTGTTGAGCAAATTCATG
GCCTTGTTTGGAGGAATCTACATGGTGAGAAACGCCTCTA
GTAAAGCTGTCATTTTTCAGTAACTTTCTGACATTTCATA
CATTGGCAACACTTTATTATAACTTCTATTAAGAACATTA
GCATTGCCAAATATTGTTGTTGTGTTTCATAAAAACGCCG
TTATATTAAACAATTAGATATTGCTTTGTTAAGCACTCCA
AAAAATGATGTTTGCTGTTTGTTCAAACTATTTATATAAA

Related Transcripts

Transcripts related to clcn2a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	clcn2a-201 (1) Ensembl	Ensembl	3,380 nt	Select Tool ZFIN BLAST
mRNA	clcn2a-203 (1) Ensembl	Ensembl	1,970 nt	Select Tool
ncRNA	clcn2a-002	Ensembl	800 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations