Transcript

scaf11-202

ID
ZDB-TSCRIPT-090929-1187
Name
scaf11-202 Nomenclature History
Previous Names
  • scaf11-001
  • sfrs2ip-001
  • srsf2ip-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000148486 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000148486.2|gene_biotype:protein_coding|ENSDARG00000045885.8 transcript_biotype:protein_coding gene_symbol:scaf11 cdna chromosome:GRCz11:4:1619584:1640356:1
GAGGCGGAACTGCAGCCTCTGACCCACATGTGGCCGGACG
CCTTTAAATCTATCGAGATTACGAGCACAAGTATTGATGA
AAGTGCCAGAAAAGTGTGTATTTCTGCGCTGAGGAGCGAC
GAGTGTGTTATTATATGATCTGAAGTCTGTGGAGGAACGC
GCGCGGAGTAATCGAGGGCTCAGAGCTGCTGTGACCCGGA
GCCAAAGATGCAGGAAGGGCCAGGAAAGGGTGGTCAGAAC
TCGGAGGACACTTTGGAGGATGAAGAGTCTCAGCGCTGCC
CGATCTGTCTGAACCGCCCCAGACGGAGCGATCGAGCCGT
TCCCGACTGCTGCAGACATGTCTACTGCTCTGCTTGCATC
CTTCGCTGGGCACAGATGGTTCAGTCCTGTCCGGTGGACC
GCAGACCCTTCAGCGTGATCTTCCTTCAGGGCTCCTCGCA
GCAGTGCATTAAGCTTCCTGTGAAGATCAAGCCCAGACTG
ATGGACAATCGCACGGGCTGCGGTCAGGATGGTCAACGCA
TGTGTGGAAACTCTGCGGCAGAGACCGGAAGTGTGGAGAG
AACGCAGGAGAAAAGAGCCAATCCCAAACAGAAATGCCAC
AGAAAATGTGACTCTGATGCATTCGTGGATTCAAATAAAA
AGGCCAGTGGAGACTCATGCCACACTCTTCTGCCCACTCA
GCATTTCCACTCATCACAGCAGGGAGCAATGGTCGGCACA
GTCATGGCCGGATCGGTTGAGGTTTGTGAGGACGGCGTCC
AGTGGAGGAGATTAGAGAGAAAGCGCAGGTTGCATCAAGC
GTCTGTTCCTAGTTTTTCTACATGTGTTCCCAGGGTGTCA
GTCCGCTCACACCTACTTCTGTCAGCTGTCTCTGCTTCTC
TGAATCTGCTGCTTTCAGAACATACAGTTCCTCATGGCAT
GGTTTGTGCCGTCACCTGCCCCAAAGGTGAGGAAAGAAAA
GGCACAAGGGGTTCTGGATCAAAGAGCTCTGTGAAGCCGG
CAGAAGCTCCTGCAACCCGGCGGTCCTCCAGACGCAGCCG
AGGAGAAGCGGAGGATTCCTCTTCTGCACACTCACAACAG
AACGATACTGACAACACCTCACAAACGCTAAATGATACTG
CGTCTACAAGCAGAGGCCAGCAAGGGAATAATCCGAGATC
TGGAGTGAAGACAAGAGGACGGCCAAAGAAGCTGAAAGTG
GAGAAACGCGAGGATGAGGAGCAAGAACCTGAAGCAGAAA
ATCACAAGGAAGATGGAGCAGCTGAATCCGAAGAATCAAA
AACTGACCAGAAAGCAAACTCGGATCAGATTGATGGTGGG
CAAGACCCAGTGGACACAAAGGAAAAGATGGAGGAGGAGA
ATGAGACAAGTCCTTCTGAGAACAAACCTGATGATGCTGA
TAACCAGGATGAGGAAACTGCAGAAGAAGAAGAAGTGGTC
ACTAAGAATGTGGTTGAAGAAGACGACAATAGCAGGCAAG
AAGTGATGACTGATGATGAAGATCAGGTGGAGCTGATGAA
TGCTTCACCAGAACTGAACCAAGACTGCTCGTCTCCTTCC
AGATCTTTAGAACCACAGGAGTCTCCGTCTGATTCCCAGG
ATGCTGTTTTATCTTTTAAAGAGCAACTGACAGCTGAATC
ACCTACAGATGCTTCAGATCAGGATTTGGATCTGAAACCA
GAGCTTGACAGCACAGAAGACAATCCTGAAAAGCAGGATT
CCAGTAGCTTTCCAGATCTCCAAGACATTGCAGATCCGAA
ACCAGAGCCTGACACCACAGAGGAGGCTTACACACAAGAC
TCCAGTAACCTTCCAGCTCTACAAGAGATTGTGGATTTGA
TACCAGAGCCTGACACCACAGAGGAGATGGCCAATCAAGA
TCCTGCTGAGAAGATAGAGAGCTCTAAAGAATCGAAAACC
TCGGATAAGAAGGAGGGACGATCCCGCAGGTCCCGCTTCC
ACTCATCTTCAACCACTTGGTCTCCGAACCGGGAGTCTAG
GAATGAACGCAGATCAAGGTCTCGATCCCGGGACCGAAGC
CACAAAACTCGCTCCACATCTCGAAACCGTGACCACCAAG
AGGAAGAACGGGACAGTCGGAGAAACCGTAGTCGTAGCCG
AAGCAGAGAGCGTAGCCGCAGACGGAGGAGTCGCTCTAGG
TCCAGGAACAGGAGCAGACCTGGACGCCGCAGCCCGTCCC
AGGAGCGTGCAGACCACGGAGGACACTCTCCCCGAAAACG
AGACTCCTGGGGTGGAGGAGGAGAAGGATGGAGAGGCAGA
GGTGGTGGACGAGGATTTCGCAATTCCAACTGGAGGAATA
ACACTGAAAAACCTGCACATTTCTCAACTAGAGACCCTGT
TTCTTCCGATAATGGAAACTTCCATGAATCCTCACCTGAT
CGAGGGAGGAACGAGAACCCTGATTGGGTGAGAGAAAGGG
AGAGGGAGAGGAGTTGGATGGATGCTGATAACCGTGGGCG
AGAGCCGGCGAGAAGAGAGGAGAATTTGGGAGATGGAGAC
ACCTGGTCTCGGGGCGGCTGGAGTGCTGGACGTGGCAGAG
GAGGCACACACTGGGCGTCCAGCCAGCAGGGGGAGCCAGG
AGATAACTGGAGGCAGCGCAATTCTTTCTCAGGGACCACT
AATAATGCAGATTCATACAATCGCTTTAATGATAGCAGAG
CTGGAGGGAAGAGGAAAGAGTCTGAAGGTGCAGAGGCTCC
ACTGGATCGCTCCGGGTGGTCGTCGGCGTCGAGTTGGGCA
GTGCGGCGAACTCTTCCCGCTGATGTGCAGAACTACTACT
CGCGCAGAGATCGAGGTGGTGGCGGCGGTGGAAACAACAT
CTGGAACAAACAAGAGGAGGATCAGAGCGCACCGACTGTC
CCAAAACAAGCAGATCCCCCACAGAATGAGCCAAGTGCGC
CGCTGCCAACTGAGGCTGTGCCAGCCATGCCTCCGCCCCT
GCTGCCGCATCAGATGGGTGTGATGGGGGTCATGCGCTTC
CCCATGGGCCCCGCTCCACTGCTCCAGAGGCCTCCCACCG
CAGGTCTGCAGGCTCCACCACAGTTCAGCCTGCCTCCTCC
AGTACCAGTGCAGCTCCACCAGGCTGGCCCGCTCATGCAG
GTGCCCTCTATAGCAGTGCAGGCTCTTCCTCCACCGCCTC
CGCCTCCTCCACCTGTGCAGCAGGGCGGATTTACTGTGGT
GCCGCCCGAAAGCCACCCATCTCAGCAGGCGATGCCCATT
TTTCCTGCGCCAGTCAAAATGTCTTTCAAACCTGTGCCGA
CCAAAGTGGTTTGTGGGCCTCCTCCTCCTCCTGCTGTGCC
GGTCAGTGCGGTGCAGCCATCCTCCACCACCTCCAGCAGC
TCCAGCACGCAGCCCAAAGCCCACGCAGACAGCTCCAAGA
AGGAGAAGGAGAAGAAACTGCAGATTCAGGAGCGCGCCGT
CAATGAGGTGAAAGCAGCCATTAAGCCATATTATCAGAAG
AACGAAATCAACAAGGACGAATATAAAGAGATCGTGCGCA
AAGCTGTGGAGAAGGTGTGTCACAGCAAGAGTGGCGAGGT
GAACGCAGACAAGGTGGCCACTCTGGTGAAGGCGTATGTG
GACAAATACAAACACATCCGCAAGAGCAAAACTGAAAAGA
GCTGAGGACGGCGGAGCTGCTGCTGACGCAACAAGTGCAA
TTCCTCCACAGCCGCTCTTAACACATTTACATACGACAAT
GAAGATTTTTCTAGAGATGATATTTTGTTTAATTTGGATT
TGATATAGTGCAAATGCCCTTTATTGGATTATGTCTGCGC
GCGCGTGTGTGTGTGTGTGTGTGAGTGCAGAGGGGGTTAA
AAGTCTGTAATGGTGTCGCTATTAATTGCATTTTGCTTCT
AAGTTTAGATGATGATCAAATGATTCATTGGTACGTCTGT
ATCTCTCTCTTTCTCCAGATCTTCAACATAAAGACTGTCA
TTTTCCCCCTTTTAGAGGCAGCCCAGCAATCCATGTGCAT
TAGCTTTATTAATCGCTGCAGATTCCGAGTGTGTGTGTGT
TTGATTATGTGTGTTTGAGATCTTAAGTGGACAGAACAAC
GGGTAGTTTTGTCGGTCGGTGAGCTGAGATTTTGTTGTCA
TATATCCAGGTTTAAAGTCCTGTACTTCTGTTTTCTGCAG
TTCAATCACTGTGTCTGTTTATCTTCCCAGAAGCAATGAA
ATAAAGCAGCTCTCTGAA

OTTDART00000008237 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000008237|OTTDARG00000007315|ZDB-GENE-041210-22 scaf11|OTTDARP00000007249 CH211-132P20.2-001 LG_ AL929171.9 Danio rerio protein_coding NOVEL, 4218 bp
GAGGCGGAACTGCAGCCTCTGACCCACATGTGGCCGGACG
CCTTTAAATCTATCGAGATTACGAGCACAAGTATTGATGA
AAGTGCCAGAAAAGTGTGTATTTCTGCGCTGAGGAGCGAC
GAGTGTGTTATTATATGATCTGAAGTCTGTGGAGGAACGC
GCGCGGAGTAATCGAGGGCTCAGAGCTGCTGTGACCCGGA
GCCAAAGATGCAGGAAGGGCCAGGAAAGGGTGGTCAGAAC
TCGGAGGACACTTTGGAGGATGAAGAGTCTCAGCGCTGCC
CGATCTGTCTGAACCGCCCCAGACGGAGCGATCGAGCCGT
TCCCGACTGCTGCAGACATGTCTACTGCTCTGCTTGCATC
CTTCGCTGGGCACAGATGGTTCAGTCCTGTCCGGTGGACC
GCAGACCCTTCAGCGTGATCTTCCTTCAGGGCTCCTCGCA
GCAGTGCATTAAGCTTCCTGTGAAGATCAAGCCCAGACTG
ATGGACAATCGCACGGGCTGCGGTCAGGATGGTCAACGCA
TGTGTGGAAACTCTGCGGCAGAGACCGGAAGTGTGGAGAG
AACGCAGGAGAAAAGAGCCAATCCCAAACAGAAATGCCAC
AGAAAATGTGACTCTGATGCATTCGTGGATTCAAATAAAA
AGGCCAGTGGAGACTCATGCCACACTCTTCTGCCCACTCA
GCATTTCCACTCATCACAGCAGGGAGCAATGGTCGGCACA
GTCATGGCCGGATCGGTTGAGGTTTGTGAGGACGGCGTCC
AGTGGAGGAGATTAGAGAGAAAGCGCAGGTTGCATCAAGC
GTCTGTTCCTAGTTTTTCTACATGTGTTCCCAGGGTGTCA
GTCCGCTCACACCTACTTCTGTCAGCTGTCTCTGCTTCTC
TGAATCTGCTGCTTTCAGAACATACAGTTCCTCATGGCAT
GGTTTGTGCCGTCACCTGCCCCAAAGGTGAGGAAAGAAAA
GGCACAAGGGGTTCTGGATCAAAGAGCTCTGTGAAGCCGG
CAGAAGCTCCTGCAACCCGGCGGTCCTCCAGACGCAGCCG
AGGAGAAGCGGAGGATTCCTCTTCTGCACACTCACAACAG
AACGATACTGACAACACCTCACAAACGCTAAATGATACTG
CGTCTACAAGCAGAGGCCAGCAAGGGAATAATCCGAGATC
TGGAGTGAAGACAAGAGGACGGCCAAAGAAGCTGAAAGTG
GAGAAACGCGAGGATGAGGAGCAAGAACCTGAAGCAGAAA
ATCACAAGGAAGATGGAGCAGCTGAATCCGAAGAATCAAA
AACTGACCAGAAAGCAAACTCGGATCAGATTGATGGTGGG
CAAGACCCAGTGGACACAAAGGAAAAGATGGAGGAGGAGA
ATGAGACAAGTCCTTCTGAGAACAAACCTGATGATGCTGA
TAACCAGGATGAGGAAACTGCAGAAGAAGAAGAAGTGGTC
ACTAAGAATGTGGTTGAAGAAGACGACAATAGCAGGCAAG
AAGTGATGACTGATGATGAAGATCAGGTGGAGCTGATGAA
TGCTTCACCAGAACTGAACCAAGACTGCTCGTCTCCTTCC
AGATCTTTAGAACCACAGGAGTCTCCGTCTGATTCCCAGG
ATGCTGTTTTATCTTTTAAAGAGCAACTGACAGCTGAATC
ACCTACAGATGCTTCAGATCAGGATTTGGATCTGAAACCA
GAGCTTGACAGCACAGAAGACAATCCTGAAAAGCAGGATT
CCAGTAGCTTTCCAGATCTCCAAGACATTGCAGATCCGAA
ACCAGAGCCTGACACCACAGAGGAGGCTTACACACAAGAC
TCCAGTAACCTTCCAGCTCTACAAGAGATTGTGGATTTGA
TACCAGAGCCTGACACCACAGAGGAGATGGCCAATCAAGA
TCCTGCTGAGAAGATAGAGAGCTCTAAAGAATCGAAAACC
TCGGATAAGAAGGAGGGACGATCCCGCAGGTCCCGCTTCC
ACTCATCTTCAACCACTTGGTCTCCGAACCGGGAGTCTAG
GAATGAACGCAGATCAAGGTCTCGATCCCGGGACCGAAGC
CACAAAACTCGCTCCACATCTCGAAACCGTGACCACCAAG
AGGAAGAACGGGACAGTCGGAGAAACCGTAGTCGTAGCCG
AAGCAGAGAGCGTAGCCGCAGACGGAGGAGTCGCTCTAGG
TCCAGGAACAGGAGCAGACCTGGACGCCGCAGCCCGTCCC
AGGAGCGTGCAGACCACGGAGGACACTCTCCCCGAAAACG
AGACTCCTGGGGTGGAGGAGGAGAAGGATGGAGAGGCAGA
GGTGGTGGACGAGGATTTCGCAATTCCAACTGGAGGAATA
ACACTGAAAAACCTGCACATTTCTCAACTAGAGACCCTGT
TTCTTCCGATAATGGAAACTTCCATGAATCCTCACCTGAT
CGAGGGAGGAACGAGAACCCTGATTGGGTGAGAGAAAGGG
AGAGGGAGAGGAGTTGGATGGATGCTGATAACCGTGGGCG
AGAGCCGGCGAGAAGAGAGGAGAATTTGGGAGATGGAGAC
ACCTGGTCTCGGGGCGGCTGGAGTGCTGGACGTGGCAGAG
GAGGCACACACTGGGCGTCCAGCCAGCAGGGGGAGCCAGG
AGATAACTGGAGGCAGCGCAATTCTTTCTCAGGGACCACT
AATAATGCAGATTCATACAATCGCTTTAATGATAGCAGAG
CTGGAGGGAAGAGGAAAGAGTCTGAAGGTGCAGAGGCTCC
ACTGGATCGCTCCGGGTGGTCGTCGGCGTCGAGTTGGGCA
GTGCGGCGAACTCTTCCCGCTGATGTGCAGAACTACTACT
CGCGCAGAGATCGAGGTGGTGGCGGCGGTGGAAACAACAT
CTGGAACAAACAAGAGGAGGATCAGAGCGCACCGACTGTC
CCAAAACAAGCAGATCCCCCACAGAATGAGCCAAGTGCGC
CGCTGCCAACTGAGGCTGTGCCAGCCATGCCTCCGCCCCT
GCTGCCGCATCAGATGGGTGTGATGGGGGTCATGCGCTTC
CCCATGGGCCCCGCTCCACTGCTCCAGAGGCCTCCCACCG
CAGGTCTGCAGGCTCCACCACAGTTCAGCCTGCCTCCTCC
AGTACCAGTGCAGCTCCACCAGGCTGGCCCGCTCATGCAG
GTGCCCTCTATAGCAGTGCAGGCTCTTCCTCCACCGCCTC
CGCCTCCTCCACCTGTGCAGCAGGGCGGATTTACTGTGGT
GCCGCCCGAAAGCCACCCATCTCAGCAGGCGATGCCCATT
TTTCCTGCGCCAGTCAAAATGTCTTTCAAACCTGTGCCGA
CCAAAGTGGTTTGTGGGCCTCCTCCTCCTCCTGCTGTGCC
GGTCAGTGCGGTGCAGCCATCCTCCACCACCTCCAGCAGC
TCCAGCACGCAGCCCAAAGCCCACGCAGACAGCTCCAAGA
AGGAGAAGGAGAAGAAACTGCAGATTCAGGAGCGCGCCGT
CAATGAGGTGAAAGCAGCCATTAAGCCATATTATCAGAAG
AACGAAATCAACAAGGACGAATATAAAGAGATCGTGCGCA
AAGCTGTGGAGAAGGTGTGTCACAGCAAGAGTGGCGAGGT
GAACGCAGACAAGGTGGCCACTCTGGTGAAGGCGTATGTG
GACAAATACAAACACATCCGCAAGAGCAAAACTGAAAAGA
GCTGAGGACGGCGGAGCTGCTGCTGACGCAACAAGTGCAA
TTCCTCCACAGCCGCTCTTAACACATTTACATACGACAAT
GAAGATTTTTCTAGAGATGATATTTTGTTTAATTTGGATT
TGATATAGTGCAAATGCCCTTTATTGGATTATGTCTGCGC
GCGCGTGTGTGTGTGTGTGTGTGAGTGCAGAGGGGGTTAA
AAGTCTGTAATGGTGTCGCTATTAATTGCATTTTGCTTCT
AAGTTTAGATGATGATCAAATGATTCATTGGTACGTCTGT
ATCTCTCTCTTTCTCCAGATCTTCAACATAAAGACTGTCA
TTTTCCCCCTTTTAGAGGCAGCCCAGCAATCCATGTGCAT
TAGCTTTATTAATCGCTGCAGATTCCGAGTGTGTGTGTGT
TTGATTATGTGTGTTTGAGATCTTAAGTGGACAGAACAAC
GGGTAGTTTTGTCGGTCGGTGAGCTGAGATTTTGTTGTCA
TATATCCAGGTTTAAAGTCCTGTACTTCTGTTTTCTGCAG
TTCAATCACTGTGTCTGTTTATCTTCCCAGAAGCAATGAA
ATAAAGCAGCTCTCTGAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations