Transcript

sh2d5-201

ID
ZDB-TSCRIPT-090929-11557
Name
sh2d5-201 Nomenclature History
Previous Names
  • sh2d5-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000003211 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000003211.10|gene_biotype:protein_coding|ENSDARG00000014324.10 transcript_biotype:nonsense_mediated_decay gene_symbol:sh2d5 cdna chromosome:GRCz11:11:37638982:37650964:1
GCGGGATTTAGGGGATTAAGGTGAGTCAGGATTGCAAAAC
CCTCAGCGGATAGTCGACCCACCCTGCCAGATTCAGTCGC
GTGGATTAATGTTTTAGAAAAGGCAAACACCACAACCAGG
TTCAGTTTGGAACATGGGTGAAACAGCTGGAAGAGAGCAT
GGGACTGTTACAAGATCAGCTGAGTACATTGGCTCGTTTC
CTGTGGATGACAGTTGTTTGGATGATCAGATTCAACAGCT
GCACACTCAGCTGAAGTCTCTCAAGAACTGCAAGAGCAAG
CGAACCGTGTCTTTGAGATTTTCTGTCAAAGGAGTCAAAG
TTTATGATGAAGATGAGACGACGCTGCTCATGGCTCATGC
GATGTGTCGAGTCTCCCTGTCCACCGCCCGTCCCTCTGAT
GCCCAGTTTGCCTTTGCCTCTCATAATCCTGGAAATTCTG
ATGCCCAGCTCTATTGCCACCTCTTCAGAGCCAGACATGC
CCGTGCTGCCCAGTTCCTAAACCTGCTTCTTTGCCGCTGT
TTTCAACTGTATTTTCTGGAGAAGCACCCAGAGGAAGCTC
AGGAGGAGTGTTCGGGGAAGAAGCCGAGTCGAGCTCCATC
GTTGCTGAACCAAGGGTTTCCCCTCAGTGTGAGCGCCTTG
GTTTCTTTCCGCAGGGCCCCAACTCAAGGTCTGCTGCCAG
GAGCTAAGTTGTTTTCACAGCAGAGCACCGAGCAAGTGAG
CAGTCCTGAAGAGGGCCCTACTTCCTCTCCAACTATAGTT
CGTAAAATGGCGATCCGGACCAAAGAGCTGCGCTCTGGAG
CTTATCGCTCTTTTACATTTACCCCCCTCAAACAGCGTCA
TCTGCAGGACAAACTGAGTGCACCACAAGGTGGGATGAGT
GTTCATAGAACACTTTCGAGACTGAAAGAGTTCCTTAGAA
AAGGAACAAGCCACTGCAAAGGCATGCATGTCTCGAGCTC
CCAGTTTGGCCGAAACAGAAGAAGCACTGGCTCAAGCTGT
GTGGTGTTGGGCTGGCGTGTCTAGTGACTGTAGCTCCTCA
CTGCTGGCAGATGATGTTTTGGGTGCTTTCCTTCTCTGTC
CTCATCCCAAAAAGCCCAATCGTGGATCTCTTATAGTTCG
TTTTTCCTCTGGACTGGTAACTTATGCTATTAAGAATTCC
AAAGGGAAGTTCCGGCTTGAGAAGTGCCACACTGACTTTG
AAAGCCTTGCTGCTTTAATGGAGCACTACACAGAGTTCGG
TGACGAGCTGGAATGTTCTCTGAGCTGCGCACGCGTCAAC
CACTGTTACGACTGGGAGGAGATGGTGAATAAGGGTTCAC
GTTTACTGCAGGACAACAAAAAAGGCACTTTTAAATGCCG
AAGTTGGGTTTGAATCATGTATTTCTTTTTAGATCTCATT
TTTATGCTATATTTTACTTAGTTTTAGGTATTTGTGGAGC
TGTTGATTTTAATAAGCTTCCCAAACAACAGTATCTCAGG
TCACTGGCACAGTTTTTGATATATATACTTTATTTTTTTT
TTAATGAACACATTTGTTTTTGCCTGTTGGCAGTAACCTC
AACCCAACCTCTAAAACACTCACTTTATTGGTGTGTTTTT
CTTTTTTTCTTAGGTTTTTTTTTTGGTTGAAAGTTCTTTT
ATAGGGAAACAAGCACTTATGTTTTTCATGTCAGTGTCAG
ATTTAAATGTGTACTCAACATTTGTATAGAGTGCATACTG
TATATATTTGTTTTACTAACGCTGTATTATGTCTTTAAAA
TCATGTTTTTGTATGTTGATCTTACATCAGGCTCTTTTTC
TCTCTTGTTTTTATGATGGCAATAGTTTAAGAGAGAATAT
TTAGTGATAACTTCAAACCCCAAATTGTCTATCACAAATT
TATTAACAGTTTTTTTTTTCTTGTACTAATTAATATTTTT
GTATCTCTTGCACATTGCACCTCTCAAATACACACAGTTT
CTATTGTTAGCTTTGCACCAATGTAAATGAAGTGATTTGC
CTCCTTTACATAAACTGATTTTACACT

OTTDART00000029131 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000029131|OTTDARG00000022588|ZDB-GENE-050327-67 sh2d5|OTTDARP00000038123 sh2d5-002 LG_ BX005282.24 Danio rerio protein_coding KNOWN, 2027 bp
GCGGGATTTAGGGGATTAAGGTGAGTCAGGATTGCAAAAC
CCTCAGCGGATAGTCGACCCACCCTGCCAGATTCAGTCGC
GTGGATTAATGTTTTAGAAAAGGCAAACACCACAACCAGG
TTCAGTTTGGAACATGGGTGAAACAGCTGGAAGAGAGCAT
GGGACTGTTACAAGATCAGCTGAGTACATTGGCTCGTTTC
CTGTGGATGACAGTTGTTTGGATGATCAGATTCAACAGCT
GCACACTCAGCTGAAGTCTCTCAAGAACTGCAAGAGCAAG
CGAACCGTGTCTTTGAGATTTTCTGTCAAAGGAGTCAAAG
TTTATGATGAAGATGAGACGACGCTGCTCATGGCTCATGC
GATGTGTCGAGTCTCCCTGTCCACCGCCCGTCCCTCTGAT
GCCCAGTTTGCCTTTGCCTCTCATAATCCTGGAAATTCTG
ATGCCCAGCTCTATTGCCACCTCTTCAGAGCCAGACATGC
CCGTGCTGCCCAGTTCCTAAACCTGCTTCTTTGCCGCTGT
TTTCAACTGTATTTTCTGGAGAAGCACCCAGAGGAAGCTC
AGGAGGAGTGTTCGGGGAAGAAGCCGAGTCGAGCTCCATC
GTTGCTGAACCAAGGGTTTCCCCTCAGTGTGAGCGCCTTG
GTTTCTTTCCGCAGGGCCCCAACTCAAGGTCTGCTGCCAG
GAGCTAAGTTGTTTTCACAGCAGAGCACCGAGCAAGTGAG
CAGTCCTGAAGAGGGCCCTACTTCCTCTCCAACTATAGTT
CGTAAAATGGCGATCCGGACCAAAGAGCTGCGCTCTGGAG
CTTATCGCTCTTTTACATTTACCCCCCTCAAACAGCGTCA
TCTGCAGGACAAACTGAGTGCACCACAAGGTGGGATGAGT
GTTCATAGAACACTTTCGAGACTGAAAGAGTTCCTTAGAA
AAGGAACAAGCCACTGCAAAGGCATGCATGTCTCGAGCTC
CCAGTTTGGCCGAAACAGAAGAAGCACTGGCTCAAGCTGT
GTGGTGTTGGGCTGGCGTGTCTAGTGACTGTAGCTCCTCA
CTGCTGGCAGATGATGTTTTGGGTGCTTTCCTTCTCTGTC
CTCATCCCAAAAAGCCCAATCGTGGATCTCTTATAGTTCG
TTTTTCCTCTGGACTGGTAACTTATGCTATTAAGAATTCC
AAAGGGAAGTTCCGGCTTGAGAAGTGCCACACTGACTTTG
AAAGCCTTGCTGCTTTAATGGAGCACTACACAGAGTTCGG
TGACGAGCTGGAATGTTCTCTGAGCTGCGCACGCGTCAAC
CACTGTTACGACTGGGAGGAGATGGTGAATAAGGGTTCAC
GTTTACTGCAGGACAACAAAAAAGGCACTTTTAAATGCCG
AAGTTGGGTTTGAATCATGTATTTCTTTTTAGATCTCATT
TTTATGCTATATTTTACTTAGTTTTAGGTATTTGTGGAGC
TGTTGATTTTAATAAGCTTCCCAAACAACAGTATCTCAGG
TCACTGGCACAGTTTTTGATATATATACTTTATTTTTTTT
TTAATGAACACATTTGTTTTTGCCTGTTGGCAGTAACCTC
AACCCAACCTCTAAAACACTCACTTTATTGGTGTGTTTTT
CTTTTTTTCTTAGGTTTTTTTTTTGGTTGAAAGTTCTTTT
ATAGGGAAACAAGCACTTATGTTTTTCATGTCAGTGTCAG
ATTTAAATGTGTACTCAACATTTGTATAGAGTGCATACTG
TATATATTTGTTTTACTAACGCTGTATTATGTCTTTAAAA
TCATGTTTTTGTATGTTGATCTTACATCAGGCTCTTTTTC
TCTCTTGTTTTTATGATGGCAATAGTTTAAGAGAGAATAT
TTAGTGATAACTTCAAACCCCAAATTGTCTATCACAAATT
TATTAACAGTTTTTTTTTTCTTGTACTAATTAATATTTTT
GTATCTCTTGCACATTGCACCTCTCAAATACACACAGTTT
CTATTGTTAGCTTTGCACCAATGTAAATGAAGTGATTTGC
CTCCTTTACATAAACTGATTTTACACT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations