Transcript

vps36-002

ID

ZDB-TSCRIPT-090929-10909

Name

vps36-002 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

vps36 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147974 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000147974.2|gene_biotype:protein_coding|ENSDARG00000057021.5 transcript_biotype:processed_transcript gene_symbol:vps36 cdna chromosome:GRCz11:10:24660142:24664449:1
ATTAGACACCTAGGCGGAAGTAATAGTTCATGTATACTAT
GCTATAGTTCTGTTATTCATCTTTCTTTTATATTTAAAGA
AAAATGGACCGATTTATGTGGACAAATGGTCTCCTGGAGA
TGAACGAAACTCTAGTAATTCAACAAAGAGGAGTAAGACT
TTACGACGGGGAAGACAAGGCTAAACTTGATGTTGGAGGA
GTTGTATTAAGCACCCATCGCCTTCTCTGGAGAGATCAGA
ATAATCATGAATGCTGTATTTGCATCCCCTTGTCACAGGT
CATATTCTTTGAGGAGCAAGCTGCAGGCATTGGAAAGAGT
GCCAAGATTGTCATTCACCTGCATCCAGCCCCTGAAAACA
AGGAACCAGGCCCTTACCAGCACAGCAAATACTCTTACAT
AAAGCTGTCCTTCAAGGAACATGGACAGATTGAGTTTTAC
AGACGTTTAACAGAAGAGATGACTCAGAAACGATGGGAAA
ATACACCCGTCTCACAGCCCATCCCCACTGGAACAGGACC
CAAGGCAGGAAGGACACGTGCAGTGGGGATTGTGGGTATT
GAGCGGAAGTTGGAGGAGAAAAGAAAAGAGACAGATAAAA
ACATATCTGAGGCGTTTGAGGATCTCAGTAAACTAATGGA
AAAGGCCAAAGAGATGGTGGAGCTCTCCAGGTCCATTGCC
AACAAAATCAAAGACAAACAGGGTGATATTACTGAAGATG
AGGTGAGCTTGAAGACTGGGACATGCTTGATGATCTGAAG
CATTCATTCTTCACTGAGACAGAAGAGCAAAACTTAAATA
ATAAGACAATTATTGATCATAAGTTGATACAGTTTTTTTT
TTTACATTTAAGGGTTCTGGCATTGAGAATTTTTATCATC
ATTTTCAGCAAAAAAGAAAAGAAAAAAA

OTTDART00000028415 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000028415|OTTDARG00000022132|ZDB-GENE-030131-7753 vps36|no_translation CH211-287A12.4-002 LG_ AL928852.7 Danio rerio protein_coding KNOWN, 908 bp
ATTAGACACCTAGGCGGAAGTAATAGTTCATGTATACTAT
GCTATAGTTCTGTTATTCATCTTTCTTTTATATTTAAAGA
AAAATGGACCGATTTATGTGGACAAATGGTCTCCTGGAGA
TGAACGAAACTCTAGTAATTCAACAAAGAGGAGTAAGACT
TTACGACGGGGAAGACAAGGCTAAACTTGATGTTGGAGGA
GTTGTATTAAGCACCCATCGCCTTCTCTGGAGAGATCAGA
ATAATCATGAATGCTGTATTTGCATCCCCTTGTCACAGGT
CATATTCTTTGAGGAGCAAGCTGCAGGCATTGGAAAGAGT
GCCAAGATTGTCATTCACCTGCATCCAGCCCCTGAAAACA
AGGAACCAGGCCCTTACCAGCACAGCAAATACTCTTACAT
AAAGCTGTCCTTCAAGGAACATGGACAGATTGAGTTTTAC
AGACGTTTAACAGAAGAGATGACTCAGAAACGATGGGAAA
ATACACCCGTCTCACAGCCCATCCCCACTGGAACAGGACC
CAAGGCAGGAAGGACACGTGCAGTGGGGATTGTGGGTATT
GAGCGGAAGTTGGAGGAGAAAAGAAAAGAGACAGATAAAA
ACATATCTGAGGCGTTTGAGGATCTCAGTAAACTAATGGA
AAAGGCCAAAGAGATGGTGGAGCTCTCCAGGTCCATTGCC
AACAAAATCAAAGACAAACAGGGTGATATTACTGAAGATG
AGGTGAGCTTGAAGACTGGGACATGCTTGATGATCTGAAG
CATTCATTCTTCACTGAGACAGAAGAGCAAAACTTAAATA
ATAAGACAATTATTGATCATAAGTTGATACAGTTTTTTTT
TTTACATTTAAGGGTTCTGGCATTGAGAATTTTTATCATC
ATTTTCAGCAAAAAAGAAAAGAAAAAAA

Related Transcripts

Transcripts related to vps36

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vps36-201 (1) Ensembl	Ensembl	1,904 nt	Select Tool ZFIN BLAST
mRNA	vps36-202 (1) Ensembl	Ensembl	610 nt	Select Tool ZFIN BLAST
mRNA	vps36-203 (1) Ensembl	Ensembl	658 nt	Select Tool ZFIN BLAST
mRNA	vps36-206 (1) Ensembl	Ensembl	4,791 nt	Select Tool ZFIN BLAST
ncRNA	vps36-002	Ensembl	908 nt
ncRNA	vps36-003 (1) Ensembl	Ensembl	478 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations