Transcript

rbfox1-002

ID

ZDB-TSCRIPT-090929-10273

Name

rbfox1-002 Nomenclature History

Previous Names

a2bp1-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

rbfox1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000055534 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000055534.6|gene_biotype:protein_coding|ENSDARG00000014746.11 transcript_biotype:retained_intron gene_symbol:rbfox1 cdna chromosome:GRCz11:3:28045341:28068211:-1
GACCCCAGACTACTCGGGCCAGACCCCGGTGGCAGAGCAC
ACGCTGAACTTGTACACCCCTGCCCAAACGCACAGTGAGC
CCAGCGGACCAGACAACAGCATACAGGCGGTCTCCGGCAC
AGCCACACAGACAGACGATTCAGCACAGACAGACAGCCAA
CAGCAAACACAGTCATCCGAAATCACAGAAATCAAAACGC
AGCCCAAGAGGCTCCACGTCTCCAACATCCCCTTCAGGTT
CAGAGATCCAGACCTCAGGCAAATGTTTGGCCAATTTGGT
AAAATCTTAGATGTTGAAATCATATTTAATGAACGAGGAT
CAAAGGTACGTTTTGTGACTTTTATCTTTTGCATGCCTTC
AATTGCTGACCAATCAGAACAGTGCAGCGAGTTAAACGTG
TATCCTGTTTACCTTAAAAACGAGACAGAAGCCAGTACCT
GCACTGTACAGAATAATGCTTGTTGTAGTCATGTTAACGT
ATGTAATGCAATCTCATATCAGCTGCTGTGCTAAAGTTAT
TAGTGCCCTGTTCAATGGAGTGTGTGGAAATGTGTTTGGC
ACTTGTCTTTGTTCAGCTACGGTGTCAAATGAAGAACATT
CTCCGCTGAGCTCTGTAATTGACAGCGTTATTCAGTGTTA
TGACACTTAGCATCATTCCTGT

OTTDART00000027727 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000027727|OTTDARG00000021708|ZDB-GENE-040927-11 rbfox1|no_translation rbfox1-002 LG_none CR388084.7,BX545915.7,CT990570.4,CR381596.11,CR792426.18 Danio rerio protein_coding KNOWN, 662 bp
GACCCCAGACTACTCGGGCCAGACCCCGGTGGCAGAGCAC
ACGCTGAACTTGTACACCCCTGCCCAAACGCACAGTGAGC
CCAGCGGACCAGACAACAGCATACAGGCGGTCTCCGGCAC
AGCCACACAGACAGACGATTCAGCACAGACAGACAGCCAA
CAGCAAACACAGTCATCCGAAATCACAGAAATCAAAACGC
AGCCCAAGAGGCTCCACGTCTCCAACATCCCCTTCAGGTT
CAGAGATCCAGACCTCAGGCAAATGTTTGGCCAATTTGGT
AAAATCTTAGATGTTGAAATCATATTTAATGAACGAGGAT
CAAAGGTACGTTTTGTGACTTTTATCTTTTGCATGCCTTC
AATTGCTGACCAATCAGAACAGTGCAGCGAGTTAAACGTG
TATCCTGTTTACCTTAAAAACGAGACAGAAGCCAGTACCT
GCACTGTACAGAATAATGCTTGTTGTAGTCATGTTAACGT
ATGTAATGCAATCTCATATCAGCTGCTGTGCTAAAGTTAT
TAGTGCCCTGTTCAATGGAGTGTGTGGAAATGTGTTTGGC
ACTTGTCTTTGTTCAGCTACGGTGTCAAATGAAGAACATT
CTCCGCTGAGCTCTGTAATTGACAGCGTTATTCAGTGTTA
TGACACTTAGCATCATTCCTGT

Related Transcripts

Transcripts related to rbfox1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rbfox1-202 (1) Ensembl	Ensembl	3,190 nt	Select Tool
mRNA	rbfox1-203 (1) Ensembl	Ensembl	944 nt	Select Tool
mRNA	rbfox1-204 (1) Ensembl	Ensembl	759 nt	Select Tool
mRNA	rbfox1-205 (1) Ensembl	Ensembl	774 nt	Select Tool
mRNA	rbfox1-206 (1) Ensembl	Ensembl	865 nt	Select Tool
mRNA	rbfox1-207 (1) Ensembl	Ensembl	4,963 nt	Select Tool ZFIN BLAST
mRNA	rbfox1-208 (1) Ensembl	Ensembl	4,987 nt	Select Tool ZFIN BLAST
ncRNA	rbfox1-002	Ensembl	662 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations