Biography and Research Interest

Publications

Non-Zebrafish Publications

Ellis, N.A., Glazer, A.M., Donde, N.N., Cleves, P.A., Agoglia, R.M., and Miller, C.T. (2015) Distinct developmental genetic mechanisms underlie convergently evolved tooth gain in sticklebacks. Development 142: 2442-2451.

Glazer, A.M., Killingbeck, E.E., Mitros, T., Rokhsar, D.S., and Miller, C.T. (2015) Genome assembly improvement and mapping convergently evolved skeletal traits in sticklebacks with Genotyping-by-Sequencing. G3 5: 1463-1472.

Erickson, P.A., Cleves, P.A., Ellis, N.A., Schwalbach, K.T., Hart, J.C., and Miller, C.T. (2015) A 190 base pair, TGF-β responsive tooth and fin enhancer is required for stickleback Bmp6 expression. Dev. Biol. 401: 310-323. PMCID: PMC4424077.

Cleves, P.A., Ellis, N.A., Jimenez, M.T., Nunez, S.M., Schluter, D., Kingsley, D.M., and Miller, C.T. (2014) Evolved tooth gain in sticklebacks is associated with a cis-regulatory allele of Bmp6. Proc. Nat. Acad. U.S.A. 111: 13912-13917. PMCID: PMC4183278.

Erickson, P.A., Glazer, A.M., Cleves, P.A., Smith, A.S. and Miller, C.T. (2014) Two developmentally temporal quantitative trait loci underlie convergent evolution of increased branchial bone length in sticklebacks. Proc. R. Soc. B 281: 20140822. PMCID: PMC4083797.

Miller, C.T.*, Glazer, A.M.*, Summers, B.R., Norman, A., Shapiro, M.D., Blackman, B.K., Cole, B., Peichel, C.L., Schluter, D., Kingsley, D.M. (* = co-first authors) (2014) Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait loci. Genetics 197: 405-20. PMCID: PMC4012497.

Glazer, A.M., Cleves, P.A., Erickson, P.A., Lam, A.Y., and Miller, C.T. (2014) Parallel developmental genetic features underlie stickleback gill raker evolution. EvoDevo 5: 19. PMCID: PMC4029907.

Yim K.M., Brewer M.S., Miller C.T., and Gillespie R.G. (2014) Comparative transcriptomics of maturity-associated color change in Hawaiian spiders. J. Hered. 105 Suppl 1:771-781. PMID: 25149253.

Jones, F.C., Grabherr, M.G., Chan, Y.F., Russell, P., Mauceli, E., Johnson, J., Pirun, M., Zody, M.C., White, S., Birney, E., Searle, S., Schmutz, J., Grimwood, J., Dickson, M.C., Myers, R.M., Miller, C.T., Summers, B.R., Knecht, A.K., Brady, S.D., Zhang, H., Pollen, A.A., Howes, T., Amemiya, C., Broad Institute Genome Sequencing Platform and Whole Genome Assembly Team, Lander, E.S., Palma, F., Kerstin Lindblad-Toh, K., and Kingsley, D.M. (2012) The genomic basis of adaptive evolution in threespine sticklebacks. Nature 484:55-61. PMCID: PMC3322419.

Albert, A.Y.K., Sawaya, S., Vines, T.H., Knecht, A., Miller, C.T., Summers, B.R., Balabhadra, S., Kingsley, D.M., and Schluter, D. (2008) The genetics of adaptive shape shift in stickleback: pleiotropy and effect size. Evolution 62:76-85. PMID: 18005154.

Miller, C.T., Beleza, S., Pollen, A.A., Schluter, D., Kittles, R.A., Shriver, M.D., and Kingsley, D.M. (2007) Cis-regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans. Cell 131:1179-1189. PMCID: PMC2900316.

Miller, C., McDonald, J., and Francis, D. (1996) Evolution of promoter sequences: elements of a canonical promoter for prespore genes of Dictyostelium. J. Mol. Evol. 43:185-193. PMID: 8703084.