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Fig. 4

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ZDB-IMAGE-221208-15
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Figures for Campbell et al., 2021
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Fig. 4

TFAP2 distinguishes PRO vs. INV state and modulates clustering and metastasis.

a. HOMER de-novo motif analysis on genes upregulated in ZMEL1-PRO vs. -INV (log2 fold change cutoff ± 1.5, padj < 0.05, ±500bp of transcription start site [TSS]). b. HOMER de-novo motif analysis of genes differentially expressed between ZMEL1-INV in 3D (clusters) vs. 2D (no clusters) (log2 fold change cutoff ± 1.5, padj < 0.05, ±500bp of TSS). c. Cluster size after 2 days in ZMEL1-PRO with CRISPR-Cas9 inactivation of tfap2a and tfap2e alone or in combination (sg_tfap2a/e) versus control (sg_scr) (p-values by linear regression; N=3 independent experiments). d. Representative images of clusters formed after 2 days from ZMEL1-PRO with sg_scr vs. sg_tfap2a/e. e. Growth of ZMEL1-PRO orthotopic primary tumors with sg_scr vs. sg_tfap2a/e (p=0.011 by linear regression; N=3 independent experiments with sg_scr/sg_tfap2a/e 24/22, 22/22, 24/24 fish per group, respectively; n=138 fish total). f. Representative composite image of extravasated (arrows) and partially extravasated (arrow-head) ZMEL1-PRO cells with sg_tfap2a/e following intravenous transplant in casper fish with kdrl-RFP transgene labeling the vasculature. g. Proportion of larval fish intravenously transplanted with ZMEL1-PRO with sg_scr or sg_tfap2a/e with extravasated cells at 1 dpt, as quantified from confocal time lapse microscopy (OR [95% CI]: 2.20 [1.05, 4.61]; p=0.038 by logistic regression; N=3 independent experiments with sg_scr/sg_tfap2a/e 20/20, 22/23, and 22/22 fish per group, respectively; n=129 fish total). See also Figure S4 and Tables S2,S3.

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Reprinted from Developmental Cell, 56(20), Campbell, N.R., Rao, A., Hunter, M.V., Sznurkowska, M.K., Briker, L., Zhang, M., Baron, M., Heilmann, S., Deforet, M., Kenny, C., Ferretti, L.P., Huang, T.H., Perlee, S., Garg, M., Nsengimana, J., Saini, M., Montal, E., Tagore, M., Newton-Bishop, J., Middleton, M.R., Corrie, P., Adams, D.J., Rabbie, R., Aceto, N., Levesque, M.P., Cornell, R.A., Yanai, I., Xavier, J.B., White, R.M., Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation, 2808-2825.e10, Copyright (2021) with permission from Elsevier. Full text @ Dev. Cell