Gene

hoxc10a

ID
ZDB-GENE-990415-110
Name
homeobox C10a
Symbol
hoxc10a Nomenclature History
Previous Names
  • hoxc10
  • z-81
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in several structures, including CNS interneuron; margin; mesoderm; neuroectoderm; and tail bud. Orthologous to human HOXC10 (homeobox C10).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
10 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxc10a Human Ortholog
No data available
Associated With hoxc10a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR020479 Homeodomain, metazoa
Family IPR046333 Homeobox protein Hox-A10/abdominal-B-like
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeobox protein Hox-A10/abdominal-B-like Homeodomain Homeodomain, metazoa
UniProtKB:A0A8M9P4Z2 116
UniProtKB:A2BE66 327
UniProtKB:F6NI81 337
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
antisense ottdart00000059827 (1) Ensembl 3,057 nt
mRNA hoxc10a-201 (1) Ensembl 1,601 nt
mRNA hoxc10a-202 (1) Ensembl 1,242 nt
mRNA hoxc10a-203 (1) Ensembl 1,769 nt
mRNA hoxc10a-204 (1) Ensembl 1,872 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations