Gene

lin28b

ID
ZDB-GENE-140811-1
Name
lin-28 homolog B (C. elegans)
Symbol
lin28b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have nucleic acid binding activity and zinc ion binding activity. Involved in chordate embryonic development. Is expressed in fin bud; head; hypothalamus; and midbrain hindbrain boundary. Orthologous to human LIN28B (lin-28 homolog B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lin28b Human Ortholog
No data available
Associated With lin28b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001878 Zinc finger, CCHC-type
Domain IPR002059 Cold-shock protein Csp, DNA-binding
Domain IPR011129 Cold-shock domain
Domain IPR054081 Lin-28A-like, second zinc knuckle
Family IPR051373 Lin-28 homolog RNA-binding protein
Homologous_superfamily IPR012340 Nucleic acid-binding, OB-fold
Homologous_superfamily IPR036875 Zinc finger, CCHC-type superfamily
Domain Details Per Protein
Protein Length Cold-shock domain Cold-shock protein Csp, DNA-binding Lin-28A-like, second zinc knuckle Lin-28 homolog RNA-binding protein Nucleic acid-binding, OB-fold Zinc finger, CCHC-type Zinc finger, CCHC-type superfamily
UniProtKB:S0BDM9 213
UniProtKB:A0A8M9P2F4 256
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations