Gene

trip6

ID

ZDB-GENE-140106-91

Name

thyroid hormone receptor interactor 6

Symbol

trip6 Nomenclature History

Previous Names

zmp:0000001131 (1)

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Orthologous to human TRIP6 (thyroid hormone receptor interactor 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Raices et al., 2017
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trip6 Human Ortholog

No data available

Associated With trip6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001781	Zinc finger, LIM-type

Domain Details Per Protein

Protein	Length	Zinc finger, LIM-type
UniProtKB:A0A8M9PYY5 InterPro	572
UniProtKB:A0A8M6YZD4 InterPro	571
UniProtKB:A0A8M2BJI7 InterPro	572
UniProtKB:A0A2R8PVS7 InterPro	571
UniProtKB:A0A1D5NSS7 InterPro	571
UniProtKB:A0A8M9PKM8 InterPro	571

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	trip6-201 (1) Ensembl	Ensembl	1,886 nt	Select Tool ZFIN BLAST
mRNA	trip6-202 (1) Ensembl	Ensembl	928 nt	Select Tool
mRNA	trip6-203 (1) Ensembl	Ensembl	3,387 nt	Select Tool
mRNA	trip6-204 (1) Ensembl	Ensembl	2,468 nt	Select Tool ZFIN BLAST
mRNA	trip6-205 (1) Ensembl	Ensembl	2,007 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations