Gene
smarca4b
- ID
- ZDB-GENE-140106-1
- Name
- SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4b
- Symbol
- smarca4b Nomenclature History
- Previous Names
-
- zmp:0000001041 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Is expressed in telencephalon.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
Coffin-Siris syndrome 4 | Alliance | Coffin-Siris syndrome 4 | 614609 |
rhabdoid tumor predisposition syndrome 2 | Alliance | {Rhabdoid tumor predisposition syndrome 2} | 613325 |
?Otosclerosis 12 | 620792 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR018359 | Bromodomain, conserved site |
Domain | IPR000330 | SNF2, N-terminal |
Domain | IPR001487 | Bromodomain |
Domain | IPR001650 | Helicase, C-terminal domain-like |
Domain | IPR006576 | BRK domain |
Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
Domain | IPR014012 | Helicase/SANT-associated domain |
Domain | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Domain | IPR029295 | Snf2, ATP coupling domain |
Domain | IPR030100 | SWI/SNF complex subunit BRG1, ATP-binding |
Domain | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain |
Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Homologous_superfamily | IPR036427 | Bromodomain-like superfamily |
Homologous_superfamily | IPR037259 | BRK domain superfamily |
Homologous_superfamily | IPR038718 | SNF2-like, N-terminal domain superfamily |
Domain Details Per Protein
Protein | Additional Resources | Length | BRK domain | BRK domain superfamily | Bromodomain | Bromodomain, conserved site | Bromodomain-like superfamily | Glutamine-Leucine-Glutamine, QLQ | Helicase, C-terminal domain-like | Helicase/SANT-associated domain | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | Snf2, ATP coupling domain | SNF2-like, N-terminal domain superfamily | SNF2, N-terminal | SNF2/RAD5-like, C-terminal helicase domain | SWI/SNF complex subunit BRG1, ATP-binding |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9QFL5 | InterPro | 1619 |
- Genome Browsers
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
smarca4-201
(1)
|
Ensembl | 4,695 nt |
Interactions and Pathways
No data available
Plasmids
No data available