Gene

gpc6b

ID
ZDB-GENE-130515-2
Name
glypican 6b
Symbol
gpc6b Nomenclature History
Previous Names
  • gpc6 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to be involved in cell migration and regulation of protein localization to membrane. Predicted to act upstream of or within regulation of signal transduction. Predicted to be located in collagen-containing extracellular matrix and plasma membrane. Predicted to be active in cell surface and synapse. Is expressed in blastomere; central nervous system; intestine; and liver. Human ortholog(s) of this gene implicated in omodysplasia 1. Orthologous to human GPC6 (glypican 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With gpc6b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
omodysplasia 1 Alliance Omodysplasia 1 258315
Associated With gpc6b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019803 Glypican, conserved site
Family IPR001863 Glypican
Domain Details Per Protein
Protein Length Glypican Glypican, conserved site
UniProtKB:V5NF92 543
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA gpc6b-201 (1) Ensembl 1,632 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations