Gene

bcl6b

ID

ZDB-GENE-120907-1

Name

BCL6B transcription repressor

Symbol

bcl6b Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity and nucleic acid binding activity. Orthologous to human BCL6B (BCL6B transcription repressor).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 3 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bcl6b Human Ortholog

No data available

Associated With bcl6b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000210	BTB/POZ domain
Domain	IPR013087	Zinc finger C2H2-type
Family	IPR050457	Zinc finger and BTB domain-containing
Homologous_superfamily	IPR011333	SKP1/BTB/POZ domain superfamily
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	BTB/POZ domain	SKP1/BTB/POZ domain superfamily	Zinc finger and BTB domain-containing	Zinc finger C2H2 superfamily	Zinc finger C2H2-type
UniProtKB:A0A8M1PRU8 InterPro	550
UniProtKB:F1QFS4 InterPro	550

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	bcl6b-201 (1) Ensembl	Ensembl		3,490 nt	Select Tool ZFIN BLAST
mRNA	bcl6b-202 (1) Ensembl	Ensembl		1,542 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations