Gene

stbd1

ID

ZDB-GENE-120817-2

Name

starch binding domain 1

Symbol

stbd1 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to have glycogen binding activity and starch binding activity. Predicted to localize to integral component of membrane. Orthologous to human STBD1 (starch binding domain 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With stbd1 Human Ortholog

No data available

Associated With stbd1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002044	Carbohydrate binding module family 20
Domain	IPR034838	Starch-binding domain-containing protein 1, CBM20 domain
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR013784	Carbohydrate-binding-like fold

Domain Details Per Protein

Protein	Length	Carbohydrate-binding-like fold	Carbohydrate binding module family 20	Immunoglobulin-like fold	Starch-binding domain-containing protein 1, CBM20 domain
UniProtKB:A0A8M1PYN9 InterPro	533
UniProtKB:A0A0R4ITF0 InterPro	532

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	stbd1-201 (1) Ensembl	Ensembl		2,714 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations