Gene

nav1b

ID

ZDB-GENE-120215-84

Name

neuron navigator 1b

Symbol

nav1b Nomenclature History

Previous Names

si:ch1073-463c22.1
zmp:0000000670 (1)

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Involved in glial cell development and retina development in camera-type eye. Orthologous to human NAV1 (neuron navigator 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Charlton-Perkins et al., 2019
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nav1b Human Ortholog

No data available

Associated With nav1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003593	AAA+ ATPase domain
Family	IPR039041	Nav/unc-53 family
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase

Domain Details Per Protein

Protein	Length	AAA+ ATPase domain	Nav/unc-53 family	P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0A8M3B0T7 InterPro	1479
UniProtKB:A0A8M6YZ18 InterPro	1819
UniProtKB:A0A8M3ATQ4 InterPro	1809
UniProtKB:A0A8M6YZ14 InterPro	1824
UniProtKB:A0A8M6Z7K9 InterPro	1805
UniProtKB:A0A8M6Z1E1 InterPro	1817
UniProtKB:A0A8M6Z7K4 InterPro	1824
UniProtKB:A0A8M6Z1D6 InterPro	1825
UniProtKB:A0A8M9QGG3 InterPro	1814
UniProtKB:A0A8M3B3R1 InterPro	1776
UniProtKB:A0A8M6YZV2 InterPro	1822
UniProtKB:A0A8M3ATS8 InterPro	1806
UniProtKB:A0A8M6Z711 InterPro	1822

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	nav1b-201 (1) Ensembl	Ensembl		1,560 nt	Select Tool ZFIN BLAST
mRNA	nav1b-202 (1) Ensembl	Ensembl		8,129 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations