Gene

nrde2

ID

ZDB-GENE-111117-3

Name

NRDE-2, necessary for RNA interference, domain containing

Symbol

nrde2 Nomenclature History

Previous Names

c14orf102

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to be involved in RNA interference and chromatin silencing by small RNA. Orthologous to human NRDE2 (NRDE-2, necessary for RNA interference, domain containing).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nrde2 Human Ortholog

No data available

Associated With nrde2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR013633	siRNA-mediated silencing protein NRDE-2
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Repeat	IPR003107	HAT (Half-A-TPR) repeat

Domain Details Per Protein

Protein	Length	HAT (Half-A-TPR) repeat	siRNA-mediated silencing protein NRDE-2	Tetratricopeptide-like helical domain superfamily
UniProtKB:E7F365 InterPro	1155

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	nrde2-201 (1) Ensembl	Ensembl		3,468 nt	Select Tool ZFIN BLAST
mRNA	nrde2-202 (1) Ensembl	Ensembl		6,775 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations