Gene

gsdf

ID

ZDB-GENE-101029-3

Name

gonadal somatic cell derived factor

Symbol

gsdf Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to have growth factor activity. Involved in oocyte maturation. Predicted to localize to extracellular region. Is expressed in granulosa cell and reproductive system.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

22 figures from 18 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 7 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gsdf Human Ortholog

No data available

Associated With gsdf Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001839	Transforming growth factor-beta, C-terminal
Homologous_superfamily	IPR029034	Cystine-knot cytokine

Domain Details Per Protein

Protein	Length	Cystine-knot cytokine	Transforming growth factor-beta, C-terminal
UniProtKB:A0A0R4IHC8 InterPro	171
UniProtKB:A0A8M3AWI9 InterPro	172
UniProtKB:B0ZE98 InterPro	172
UniProtKB:A0A8M1RP53 InterPro	187

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	gsdf-201 (1) Ensembl	Ensembl		1,267 nt	Select Tool ZFIN BLAST
mRNA	gsdf-202 (1) Ensembl	Ensembl		1,343 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations