Gene

virma

ID

ZDB-GENE-100922-238

Name

vir like m6A methyltransferase associated

Symbol

virma Nomenclature History

Previous Names

fa20f07
si:ch211-79l20.4
wu:fa20f07

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to be involved in mRNA methylation. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nucleus. Predicted to be part of RNA N6-methyladenosine methyltransferase complex. Orthologous to human VIRMA (vir like m6A methyltransferase associated).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With virma Human Ortholog

No data available

Associated With virma Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR031801	Virilizer, N-terminal
Family	IPR026736	Protein virilizer

Domain Details Per Protein

Protein	Length	Protein virilizer	Virilizer, N-terminal
UniProtKB:A0A8N7T781 InterPro	1838
UniProtKB:A0A8M2B4B7 InterPro	1850
UniProtKB:A0A0R4IAI1 InterPro	1847

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	virma-201 (1) Ensembl	Ensembl	5,670 nt	Select Tool ZFIN BLAST
mRNA	virma-202 (1) Ensembl	Ensembl	737 nt	Select Tool ZFIN BLAST
mRNA	virma-203 (1) Ensembl	Ensembl	5,544 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations