Gene

tsnare1

ID
ZDB-GENE-100922-189
Name
T-SNARE Domain Containing 1
Symbol
tsnare1 Nomenclature History
Previous Names
  • si:ch211-208k15.1 (1)
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have SNAP receptor activity and SNARE binding activity. Predicted to be involved in intracellular protein transport; vesicle docking; and vesicle fusion. Predicted to localize to SNARE complex; endomembrane system; and integral component of membrane. Orthologous to human TSNARE1 (t-SNARE domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Thyme et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tsnare1 Human Ortholog
No data available
Associated With tsnare1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR006012 Syntaxin/epimorphin, conserved site
Domain IPR000727 Target SNARE coiled-coil homology domain
Domain IPR006011 Syntaxin, N-terminal domain
Family IPR045242 Syntaxin
Homologous_superfamily IPR010989 SNARE
Domain Details Per Protein
Protein Length SNARE Syntaxin Syntaxin/epimorphin, conserved site Syntaxin, N-terminal domain Target SNARE coiled-coil homology domain
UniProtKB:A0A0R4IK07 287
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-208k15.1-201 (1) Ensembl 1,560 nt
mRNA si:ch211-208k15.1-203 (1) Ensembl 3,971 nt
mRNA si:ch211-208k15.1-204 (1) Ensembl 4,699 nt
ncRNA si:ch211-208k15.1-001 (1) Ensembl 787 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations