Gene

ptprea

ID

ZDB-GENE-100714-1

Name

protein tyrosine phosphatase receptor type Ea

Symbol

ptprea Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have protein tyrosine phosphatase activity. Involved in convergent extension involved in gastrulation. Predicted to localize to integral component of membrane. Orthologous to human PTPRE (protein tyrosine phosphatase receptor type E).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptprea Human Ortholog

No data available

Associated With ptprea Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Active_site	IPR016130	Protein-tyrosine phosphatase, active site
Domain	IPR000242	Tyrosine-specific protein phosphatase, PTPase domain
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Family	IPR016336	Receptor tyrosine-protein phosphatase, alpha/epsilon-type
Family	IPR050348	Protein-Tyrosine Phosphatase
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like

Domain Details Per Protein

Protein	Length	Protein-Tyrosine Phosphatase	Protein-tyrosine phosphatase, active site	Protein-tyrosine phosphatase, catalytic	Protein-tyrosine phosphatase-like	Receptor tyrosine-protein phosphatase, alpha/epsilon-type	Tyrosine-specific protein phosphatase, PTPase domain	Tyrosine-specific protein phosphatases domain
UniProtKB:A0A8M9QJB7 InterPro	711
UniProtKB:A0A8M9PXB4 InterPro	710
UniProtKB:E7EZG7 InterPro	681
UniProtKB:A0A8M1RFA7 InterPro	634

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptprea-201 (1) Ensembl	Ensembl	5,539 nt	Select Tool ZFIN BLAST
mRNA	ptprea-202 (1) Ensembl	Ensembl	2,091 nt	Select Tool ZFIN BLAST
mRNA	ptprea-203 (1) Ensembl	Ensembl	2,402 nt	Select Tool ZFIN BLAST
mRNA	ptprea-204 (1) Ensembl	Ensembl	5,454 nt	Select Tool ZFIN BLAST
mRNA	ptprea-205 (1) Ensembl	Ensembl	2,483 nt	Select Tool ZFIN BLAST
mRNA	ptprea-206 (1) Ensembl	Ensembl	5,391 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations