Gene

chpfb

ID
ZDB-GENE-100504-1
Name
chondroitin polymerizing factor b
Symbol
chpfb Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have acetylgalactosaminyltransferase activity. Predicted to localize to Golgi cisterna membrane and integral component of membrane. Is expressed in intermediate cell mass of mesoderm; nervous system; notochord; paraxial mesoderm; and somite. Orthologous to human CHPF (chondroitin polymerizing factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from Filipek-Górniok et al., 2013
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With chpfb Human Ortholog
No data available
Associated With chpfb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR008428 Chondroitin N-acetylgalactosaminyltransferase
Family IPR051227 Chondroitin sulfate glycosyltransferase
Domain Details Per Protein
Protein Length Chondroitin N-acetylgalactosaminyltransferase Chondroitin sulfate glycosyltransferase
UniProtKB:E7F9K2 770
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA chpfb-201 (1) Ensembl 2,802 nt
mRNA chpfb-202 (1) Ensembl 2,529 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations