Gene

slc4a10a

ID

ZDB-GENE-100215-3

Name

solute carrier family 4 member 10a

Symbol

slc4a10a Nomenclature History

Previous Names

slc4a10

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to enable sodium:bicarbonate symporter activity. Predicted to be involved in bicarbonate transport; regulation of intracellular pH; and transmembrane transport. Predicted to act upstream of or within monoatomic anion transport. Predicted to be located in membrane. Predicted to be active in basolateral plasma membrane. Is expressed in brain; eye; and spleen. Orthologous to human SLC4A10 (solute carrier family 4 member 10).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Lee et al., 2011

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc4a10a Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Neurodevelopmental disorder with hypotonia and characteristic brain abnormalities	620746

Associated With slc4a10a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR011531	Bicarbonate transporter-like, transmembrane domain
Domain	IPR013769	Band 3 cytoplasmic domain
Family	IPR003020	Bicarbonate transporter, eukaryotic
Family	IPR003024	Sodium bicarbonate cotransporter
Homologous_superfamily	IPR016152	Phosphotransferase/anion transporter

Domain Details Per Protein

Protein	Length	Band 3 cytoplasmic domain	Bicarbonate transporter, eukaryotic	Bicarbonate transporter-like, transmembrane domain	Phosphotransferase/anion transporter	Sodium bicarbonate cotransporter
UniProtKB:A0A8M9PV93 InterPro	1200
UniProtKB:A0A8M9Q7I9 InterPro	1188
UniProtKB:A0A2R8RMV2 InterPro	1115
UniProtKB:A0A8M9QDF6 InterPro	1121
UniProtKB:A0A8M9QHY1 InterPro	1211

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	slc4a10a-201 (1) Ensembl	Ensembl	3,720 nt	Select Tool ZFIN BLAST
mRNA	slc4a10a-202 (1) Ensembl	Ensembl	6,977 nt	Select Tool ZFIN BLAST
mRNA	slc4a10a-203 (1) Ensembl	Ensembl	3,318 nt	Select Tool ZFIN BLAST
mRNA	slc4a10a-204 (1) Ensembl	Ensembl	3,765 nt	Select Tool ZFIN BLAST
mRNA	slc4a10a-205 (1) Ensembl	Ensembl	3,768 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations