Gene
col27a1b
- ID
- ZDB-GENE-100119-2
- Name
- collagen, type XXVII, alpha 1b
- Symbol
- col27a1b Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have extracellular matrix structural constituent. Involved in bone mineralization; notochord morphogenesis; and skeletal system development. Predicted to localize to extracellular matrix and extracellular space. Is expressed in cranial cartilage; notochord; and notochord posterior region. Orthologous to human COL27A1 (collagen type XXVII alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Steel syndrome | 615155 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Collagen superfamily | Collagen triple helix repeat | Concanavalin A-like lectin/glucanase domain superfamily | Fibrillar collagen, C-terminal | Thrombospondin-like, N-terminal domain |
|---|---|---|---|---|---|---|
|
UniProtKB:A0MSJ1
|
1658 | |||||
|
UniProtKB:A0A8M9Q8Q7
|
883 | |||||
|
UniProtKB:A0A8M6Z0M4
|
1258 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
col27a1b-201
(1)
|
Ensembl | 3,993 nt |
Interactions and Pathways
No data available
Plasmids
No data available