Gene

phf3

ID
ZDB-GENE-090313-207
Name
PHD finger protein 3
Symbol
phf3 Nomenclature History
Previous Names
  • si:dkey-188i13.1
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Predicted to be involved in transcription, DNA-templated. Orthologous to human PHF3 (PHD finger protein 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Diotel et al., 2015
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With phf3 Human Ortholog
No data available
Associated With phf3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019786 Zinc finger, PHD-type, conserved site
Domain IPR001965 Zinc finger, PHD-type
Domain IPR003618 Transcription elongation factor S-II, central domain
Domain IPR012921 Spen paralogue and orthologue SPOC, C-terminal
Domain IPR019787 Zinc finger, PHD-finger
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR036575 Transcription elongation factor S-II, central domain superfamily
Domain Details Per Protein
Protein Length Spen paralogue and orthologue SPOC, C-terminal Transcription elongation factor S-II, central domain Transcription elongation factor S-II, central domain superfamily Zinc finger, FYVE/PHD-type Zinc finger, PHD-finger Zinc finger, PHD-type Zinc finger, PHD-type, conserved site Zinc finger, RING/FYVE/PHD-type
UniProtKB:B8A483 1691
UniProtKB:A0A8M6Z9N0 1690
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA phf3-201 (1) Ensembl 5,796 nt
mRNA phf3-202 (1) Ensembl 1,219 nt
mRNA phf3-203 (1) Ensembl 425 nt
mRNA phf3-204 (1) Ensembl 5,076 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations