Gene

atrn

ID

ZDB-GENE-090312-21

Name

attractin

Symbol

atrn Nomenclature History

Previous Names

si:dkey-259n11.1

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to enable chromatin binding activity. Acts upstream of or within regulation of actomyosin structure organization. Predicted to be located in membrane. Predicted to be active in cytoplasm. Is expressed in blastomere; forebrain; midbrain; and otic vesicle. Orthologous to human ATRN (attractin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Sun et al., 2017

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Sun et al., 2017
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atrn Human Ortholog

No data available

Associated With atrn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000742	EGF-like domain
Domain	IPR000859	CUB domain
Domain	IPR001304	C-type lectin-like
Domain	IPR002049	Laminin-type EGF domain
Domain	IPR016201	PSI domain
Domain	IPR034011	Attractin-like, C-type lectin-like domain
Family	IPR051568	LZTR1/Attractin
Homologous_superfamily	IPR015915	Kelch-type beta propeller
Homologous_superfamily	IPR016186	C-type lectin-like/link domain superfamily
Homologous_superfamily	IPR016187	C-type lectin fold
Homologous_superfamily	IPR035914	Spermadhesin, CUB domain superfamily
Repeat	IPR002165	Plexin repeat
Repeat	IPR006652	Kelch repeat type 1