Gene

npnta

ID
ZDB-GENE-090312-201
Name
nephronectin a
Symbol
npnta Nomenclature History
Previous Names
  • npnt
  • si:ch211-202n8.2
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Involved in atrioventricular valve development and heart trabecula formation. Predicted to localize to membrane. Used to study membranous glomerulonephritis and proteinuria. Is expressed in several structures, including digestive system; endoderm; head; heart; and tail bud. Orthologous to human NPNT (nephronectin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
10 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With npnta Human Ortholog
No data available
Associated With npnta Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018097 EGF-like calcium-binding, conserved site
Domain IPR000742 EGF-like domain
Domain IPR000998 MAM domain
Domain IPR001881 EGF-like calcium-binding domain
Domain IPR024731 EGF domain
Domain IPR049883 NOTCH1 EGF-like calcium-binding domain
Family IPR052235 Nephronectin domain-containing protein
Homologous_superfamily IPR009030 Growth factor receptor cysteine-rich domain superfamily
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
PTM IPR000152 EGF-type aspartate/asparagine hydroxylation site
Domain Details Per Protein
Protein Length Concanavalin A-like lectin/glucanase domain superfamily EGF domain EGF-like calcium-binding, conserved site EGF-like calcium-binding domain EGF-like domain EGF-type aspartate/asparagine hydroxylation site Growth factor receptor cysteine-rich domain superfamily MAM domain Nephronectin domain-containing protein NOTCH1 EGF-like calcium-binding domain
UniProtKB:A0A8M2B6Z0 619
UniProtKB:A0A8M3AVI7 588
UniProtKB:B8A5G4 605
UniProtKB:A0A8M3B3H9 636
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA npnt-201 (1) Ensembl 2,441 nt
mRNA npnt-202 (1) Ensembl 431 nt
mRNA npnta-204 (1) Ensembl 1,907 nt
mRNA npnta-205 (1) Ensembl 1,856 nt
ncRNA npnt-003 (1) Ensembl 547 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations