Gene

ngs

ID
ZDB-GENE-080722-29
Name
notochord granular surface
Symbol
ngs Nomenclature History
Previous Names
  • chordostatin (1)
  • zgc:194470
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
A structural constituent of cytoskeleton. Involved in notochord cell development and notochord morphogenesis. Predicted to localize to intermediate filament. Is expressed in notochord.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Tong et al., 2013
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from Tong et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ngs Human Ortholog
No data available
Associated With ngs Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006821 Intermediate filament head, DNA-binding domain
Domain IPR039008 Intermediate filament, rod domain
Family IPR050405 Intermediate filament structural protein
Domain Details Per Protein
Protein Length Intermediate filament head, DNA-binding domain Intermediate filament, rod domain Intermediate filament structural protein
UniProtKB:A0A8M2BBY4 511
UniProtKB:B3DI58 539
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ngs-202 (1) Ensembl 2,388 nt
ncRNA ngs-002 (1) Ensembl 539 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations