Gene

prdm13

ID
ZDB-GENE-080616-1
Name
PR domain containing 13
Symbol
prdm13 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Predicted to be involved in regulation of gene expression. Predicted to localize to nucleus. Is expressed in nervous system. Orthologous to human PRDM13 (PR/SET domain 13).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Coolen et al., 2022
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prdm13 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Cerebellar dysfunction, impaired intellectual development, and hypogonadotropic hypogonadism 619761
Pontocerebellar hypoplasia, type 17 619909
Associated With prdm13 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR013087 Zinc finger C2H2-type
Domain IPR044407 PRDM13, PR/SET domain
Family IPR050717 C2H2-type Zinc-Finger Transcription Regulators
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Homologous_superfamily IPR046341 SET domain superfamily
Domain Details Per Protein
Protein Length C2H2-type Zinc-Finger Transcription Regulators PRDM13, PR/SET domain SET domain SET domain superfamily Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:F1R7D7 614
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA prdm13-201 (1) Ensembl 2,671 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations