Gene

smarcd3b

ID
ZDB-GENE-080509-2
Name
SWI/SNF related BAF chromatin remodeling complex subunit D3b
Symbol
smarcd3b Nomenclature History
Previous Names
  • smarcd3 (1)
  • smarcd3l
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Involved in cardiac muscle cell differentiation; determination of left/right symmetry; and heart morphogenesis. Predicted to localize to SWI/SNF complex; nBAF complex; and npBAF complex. Is expressed in several structures, including brain; immature eye; margin; notochord; and tail bud. Orthologous to human SMARCD3 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smarcd3b Human Ortholog
No data available
Associated With smarcd3b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003121 SWIB/MDM2 domain
Domain IPR019835 SWIB domain
Domain IPR038043 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 3, SWIB domain
Homologous_superfamily IPR036885 SWIB/MDM2 domain superfamily
Domain Details Per Protein
Protein Length SWIB domain SWIB/MDM2 domain SWIB/MDM2 domain superfamily SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 3, SWIB domain
UniProtKB:A0A8M2BDZ5 454
UniProtKB:B2KL77 476
UniProtKB:A0A8M2BDT5 506
UniProtKB:A0A8M9Q1P6 532
UniProtKB:A0A8M9Q7X8 510
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smarcd3b-201 (1) Ensembl 1,533 nt
mRNA smarcd3b-202 (1) Ensembl 533 nt
mRNA smarcd3b-203 (1) Ensembl 4,256 nt
mRNA smarcd3b-204 (1) Ensembl 1,417 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations