Gene

nlrc5

ID
ZDB-GENE-080429-2
Name
NLR family, CARD domain containing 5
Symbol
nlrc5 Nomenclature History
Previous Names
  • nod4
  • si:ch211-122c9.5
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Predicted to have ATP binding activity. Predicted to be involved in intracellular signal transduction. Orthologous to human NLRC5 (NLR family CARD domain containing 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nlrc5 Human Ortholog
No data available
Associated With nlrc5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR007111 NACHT nucleoside triphosphatase
Domain IPR041267 NACHT, LRR and PYD domains-containing protein, helical domain HD2
Family IPR051261 NOD-like receptor (NLR)
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR006553 Leucine-rich repeat, cysteine-containing subtype
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat, cysteine-containing subtype Leucine-rich repeat domain superfamily NACHT, LRR and PYD domains-containing protein, helical domain HD2 NACHT nucleoside triphosphatase NOD-like receptor (NLR) P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0A2R8RJK5 1718
UniProtKB:K7DYB6 1746
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nlrc5-201 (1) Ensembl 6,341 nt
mRNA nlrc5-202 (1) Ensembl 6,425 nt
mRNA nlrc5-203 (1) Ensembl 6,173 nt
mRNA nlrc5-204 (1) Ensembl 6,341 nt
mRNA nlrc5-205 (1) Ensembl 6,585 nt
mRNA nlrc5-206 (1) Ensembl 5,984 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations