Gene

scrt1a

ID
ZDB-GENE-080219-30
Name
scratch family zinc finger 1a
Symbol
scrt1a Nomenclature History
Previous Names
  • sb:eu669
  • zgc:172288
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in nervous system; neural tube; and spinal cord neural rod. Orthologous to human SCRT1 (scratch family transcriptional repressor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With scrt1a Human Ortholog
No data available
Associated With scrt1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Family IPR050527 Snail/Krueppel C2H2-type Zinc-finger
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Domain Details Per Protein
Protein Length Snail/Krueppel C2H2-type Zinc-finger Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:A8WGA5 279
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA scrt1a-201 (1) Ensembl 1,562 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations