Gene

btbd6a

ID

ZDB-GENE-080218-26

Name

BTB (POZ) domain containing 6a

Symbol

btbd6a Nomenclature History

Previous Names

zgc:172197 (1)

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Involved in regulation of neurogenesis. Predicted to localize to cytosol. Is expressed in nervous system; neuroblasts; posterior neural keel; posterior neural plate; and spinal cord neural tube. Orthologous to human BTBD6 (BTB domain containing 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from Sobieszczuk et al., 2010

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Sobieszczuk et al., 2010
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With btbd6a Human Ortholog

No data available

Associated With btbd6a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000210	BTB/POZ domain
Domain	IPR011705	BTB/Kelch-associated
Domain	IPR012983	PHR
Domain	IPR049737	BTB/POZ domain-containing protein 6-A-like, BTB and C-terminal Kelch domain
Domain	IPR049738	BTB/POZ domain-containing protein 6, BTB/POZ domain
Homologous_superfamily	IPR011333	SKP1/BTB/POZ domain superfamily
Homologous_superfamily	IPR038648	PHR domain superfamily

Domain Details Per Protein

Protein	Length	BTB/Kelch-associated	BTB/POZ domain	BTB/POZ domain-containing protein 6-A-like, BTB and C-terminal Kelch domain	BTB/POZ domain-containing protein 6, BTB/POZ domain	PHR	PHR domain superfamily	SKP1/BTB/POZ domain superfamily
UniProtKB:A9JRD8 InterPro	540
UniProtKB:A0A8M2BHZ5 InterPro	484

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	btbd6a-201 (1) Ensembl	Ensembl		2,130 nt	Select Tool ZFIN BLAST
mRNA	btbd6a-202 (1) Ensembl	Ensembl		2,130 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations