Gene

csf1a

ID

ZDB-GENE-080204-107

Name

colony stimulating factor 1a (macrophage)

Symbol

csf1a Nomenclature History

Previous Names

csf1-1 (1)
mcsf1 (1)
zgc:172186 (1)

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have cytokine activity. Predicted to localize to extracellular space. Human ortholog(s) of this gene implicated in interstitial cystitis. Is expressed in integument and iridophore. Orthologous to human CSF1 (colony stimulating factor 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 4 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 5 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With csf1a Human Ortholog

No data available

Associated With csf1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR008001	Macrophage colony stimulating factor-1
Homologous_superfamily	IPR009079	Four-helical cytokine-like, core

Domain Details Per Protein

Protein	Length	Four-helical cytokine-like, core	Macrophage colony stimulating factor-1
UniProtKB:A9JRD6 InterPro	526

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	csf1a-201 (1) Ensembl	Ensembl		2,441 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Addgene:168103

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations