Gene

smtnb

ID
ZDB-GENE-070912-2
Name
smoothelin b
Symbol
smtnb Nomenclature History
Previous Names
  • smtn
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to be involved in actin cytoskeleton organization. Predicted to localize to filamentous actin and microtubule organizing center. Is expressed in gut and swim bladder. Orthologous to human SMTN (smoothelin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smtnb Human Ortholog
No data available
Associated With smtnb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Domain IPR022189 Smoothelin
Family IPR050540 F-actin Monooxygenase Mical
Homologous_superfamily IPR036872 CH domain superfamily
Domain Details Per Protein
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smtnb-201 (1) Ensembl 1,004 nt
mRNA smtnb-202 (1) Ensembl 4,492 nt
mRNA smtnb-203 (1) Ensembl 304 nt
mRNA smtnb-204 (1) Ensembl 1,031 nt
mRNA smtnb-205 (1) Ensembl 1,094 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations