Gene
ptprdb
- ID
- ZDB-GENE-070615-38
- Name
- protein tyrosine phosphatase receptor type Db
- Symbol
- ptprdb Nomenclature History
- Previous Names
-
- ptprd
- zgc:165626
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Description
- Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in nervous system development; signal transduction; and synaptic membrane adhesion. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in plasma membrane. Is expressed in Rohon-Beard neurons; lateral line ganglion; olfactory placode; and trigeminal ganglion. Human ortholog(s) of this gene implicated in coronary artery disease; diabetes mellitus; hypertension; and type 2 diabetes mellitus. Orthologous to human PTPRD (protein tyrosine phosphatase receptor type D).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Active_site | IPR016130 | Protein-tyrosine phosphatase, active site |
Domain | IPR000242 | Tyrosine-specific protein phosphatase, PTPase domain |
Domain | IPR000387 | Tyrosine-specific protein phosphatases domain |
Domain | IPR003595 | Protein-tyrosine phosphatase, catalytic |
Domain | IPR003598 | Immunoglobulin subtype 2 |
Domain | IPR003599 | Immunoglobulin domain subtype |
Domain | IPR003961 | Fibronectin type III |
Domain | IPR007110 | Immunoglobulin-like domain |
Domain | IPR013098 | Immunoglobulin I-set |
Family | IPR050713 | Receptor-type Tyrosine-protein Phosphatases/Ushers |
Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
Homologous_superfamily | IPR029021 | Protein-tyrosine phosphatase-like |
Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
Protein | Additional Resources | Length | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin domain subtype | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Protein-tyrosine phosphatase, active site | Protein-tyrosine phosphatase, catalytic | Protein-tyrosine phosphatase-like | Receptor-type Tyrosine-protein Phosphatases/Ushers | Tyrosine-specific protein phosphatase, PTPase domain | Tyrosine-specific protein phosphatases domain |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9PV64 | InterPro | 1942 | ||||||||||||||
UniProtKB:A0A8M9PHQ2 | InterPro | 1949 | ||||||||||||||
UniProtKB:A5PLI0 | InterPro | 205 | ||||||||||||||
UniProtKB:A0A8M9PHN2 | InterPro | 1951 | ||||||||||||||
UniProtKB:A0A8M3AYU7 | InterPro | 1505 | ||||||||||||||
UniProtKB:A0A8M9PI44 | InterPro | 1517 | ||||||||||||||
UniProtKB:A0A8M9Q6X8 | InterPro | 1940 | ||||||||||||||
UniProtKB:A0A8M9QBW3 | InterPro | 1946 | ||||||||||||||
UniProtKB:A0A8M9PHF1 | InterPro | 1955 | ||||||||||||||
UniProtKB:A0A0R4IXV2 | InterPro | 1515 | ||||||||||||||
UniProtKB:A0A8M9PVC0 | InterPro | 1523 | ||||||||||||||
UniProtKB:A0A8M3B7T2 | InterPro | 1512 | ||||||||||||||
UniProtKB:A0A8M9PVJ4 | InterPro | 1513 | ||||||||||||||
UniProtKB:A0A8M3B7T6 | InterPro | 1509 | ||||||||||||||
UniProtKB:A0A8M6YWY1 | InterPro | 1947 | ||||||||||||||
UniProtKB:A0A8M6YXY1 | InterPro | 1938 | ||||||||||||||
UniProtKB:B8A5J5 | InterPro | 1934 | ||||||||||||||
UniProtKB:A0A8M9Q0S4 | InterPro | 1954 | ||||||||||||||
UniProtKB:A0A8M9PV18 | InterPro | 1948 | ||||||||||||||
UniProtKB:A0A8M9Q0T4 | InterPro | 1952 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
ptprdb-201
(1)
|
Ensembl | 1,140 nt | ||
mRNA |
ptprdb-202
(1)
|
Ensembl | 6,806 nt | ||
mRNA |
ptprdb-203
(1)
|
Ensembl | 957 nt | ||
mRNA |
ptprdb-204
(1)
|
Ensembl | 5,805 nt | ||
mRNA |
ptprdb-205
(1)
|
Ensembl | 4,548 nt |
Interactions and Pathways
No data available
Plasmids