Gene
prf1.6
- ID
- ZDB-GENE-070410-126
- Name
- perforin 1.6
- Symbol
- prf1.6 Nomenclature History
- Previous Names
-
- prf8b (1)
- zgc:163021
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Description
- Predicted to have calcium ion binding activity. Predicted to be involved in cytolysis. Is expressed in gill; liver; muscle; and pleuroperitoneal region.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from Varela et al., 2016
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020863 | Membrane attack complex component/perforin domain, conserved site |
| Domain | IPR000008 | C2 domain |
| Domain | IPR020864 | Membrane attack complex component/perforin (MACPF) domain |
| Family | IPR052784 | Perforin-1 pore-forming |
| Homologous_superfamily | IPR035892 | C2 domain superfamily |
Domain Details Per Protein
| Protein | Length | C2 domain | C2 domain superfamily | Membrane attack complex component/perforin domain, conserved site | Membrane attack complex component/perforin (MACPF) domain | Perforin-1 pore-forming |
|---|---|---|---|---|---|---|
|
UniProtKB:A4QP80
|
516 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
prf1.6-201
(1)
|
Ensembl | 3,103 nt | ||
| mRNA |
prf1.6-202
(1)
|
Ensembl | 907 nt |
Interactions and Pathways
No data available
Plasmids
No data available