Gene

smcr8b

ID
ZDB-GENE-061122-1
Name
Smith-Magenis syndrome chromosome region, candidate 8b
Symbol
smcr8b Nomenclature History
Previous Names
  • smcr8
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to contribute to Rab guanyl-nucleotide exchange factor activity. Predicted to be involved in negative regulation of gene expression; regulation of TOR signaling; and regulation of macroautophagy. Predicted to colocalize with Atg1/ULK1 kinase complex. Orthologous to human SMCR8 (SMCR8-C9orf72 complex subunit).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Liu et al., 2022
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smcr8b Human Ortholog
No data available
Associated With smcr8b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR037520 Folliculin/SMCR8, longin domain
Domain IPR037521 Folliculin/SMCR8, tripartite DENN domain
Domain Details Per Protein
Protein Length Folliculin/SMCR8, longin domain Folliculin/SMCR8, tripartite DENN domain
UniProtKB:Q6PUR7 985
UniProtKB:B3DGB6 985
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smcr8b-201 (1) Ensembl 3,662 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations