Gene

trim109

ID

ZDB-GENE-060616-101

Name

tripartite motif containing 109

Symbol

trim109 Nomenclature History

Previous Names

cb336 (1)
sb:cb336
zgc:136894 (1)

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to have zinc ion binding activity. Is expressed in adaxial cell; musculature system; myotome; and somite. Orthologous to several human genes including TRIM26 (tripartite motif containing 26); TRIM31 (tripartite motif containing 31); and TRIM4 (tripartite motif containing 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from Thisse et al., 2001

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb336 (7 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trim109 Human Ortholog

No data available

Associated With trim109 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR001870	B30.2/SPRY domain
Domain	IPR003879	Butyrophylin-like, SPRY domain
Domain	IPR027370	Zinc finger, RING-type, eukaryotic
Family	IPR050143	Tripartite motif-containing
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR043136	B30.2/SPRY domain superfamily