Gene

sympk

ID

ZDB-GENE-060526-361

Name

symplekin

Symbol

sympk Nomenclature History

Previous Names

si:dkeyp-117b8.1

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Orthologous to human SYMPK (symplekin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With sympk Human Ortholog

No data available

Associated With sympk Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR022075	Symplekin C-terminal
Domain	IPR032460	Symplekin/Pta1, N-terminal
Family	IPR021850	Symplekin/Pta1
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold

Domain Details Per Protein

Protein	Length	Armadillo-like helical	Armadillo-type fold	Symplekin C-terminal	Symplekin/Pta1	Symplekin/Pta1, N-terminal
UniProtKB:A2CET0 InterPro	1247
UniProtKB:A0A0R4I9D6 InterPro	1248

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	sympk-201 (1) Ensembl	Ensembl		6,361 nt	Select Tool ZFIN BLAST
mRNA	sympk-202 (1) Ensembl	Ensembl		4,142 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations