Gene

alkbh4

ID
ZDB-GENE-060526-275
Name
alkB homolog 4, lysine demthylase
Symbol
alkbh4 Nomenclature History
Previous Names
  • si:dkey-261j4.10
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have actin binding activity; demethylase activity; and oxidoreductase activity. Involved in epiboly involved in gastrulation with mouth forming second and regulation of actomyosin structure organization. Predicted to localize to contractile ring and midbody. Is expressed in blastomere; forebrain; midbrain; oocyte; and otic vesicle. Orthologous to human ALKBH4 (alkB homolog 4, lysine demethylase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from Sun et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Sun et al., 2017
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With alkbh4 Human Ortholog
No data available
Associated With alkbh4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR032857 Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4
Homologous_superfamily IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Domain Details Per Protein
Protein Length Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
UniProtKB:A0A2R8RZS3 188
UniProtKB:A0A8M1P7U9 268
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA alkbh4-201 (1) Ensembl 957 nt
mRNA alkbh4-202 (1) Ensembl 922 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations